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GLP9 germin-like protein 9 [ Arabidopsis thaliana (thale cress) ]

Gene ID: 827113, updated on 18-Sep-2024

Summary

Official Symbol
GLP9
Official Full Name
germin-like protein 9
Primary source
TAIR:AT4G14630
Locus tag
AT4G14630
See related
Araport:AT4G14630
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
DL3355W; FCAALL.278; germin-like protein 9
Summary
germin-like protein with N-terminal signal sequence that may target it to the vacuole, plasma membrane and/or outside the cell.
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Genomic context

See GLP9 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
2
Sequence:
Chromosome: 4; NC_003075.7 (8392825..8393860)

Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene sporulation-specific protein Neighboring gene hypothetical protein (DUF506) Neighboring gene calmodulin 8 Neighboring gene uncharacterized protein

General gene information

NM_117545.4

Gene Ontology Provided by TAIR

Component Evidence Code Pubs
located_in extracellular region  
located_in extracellular region PubMed 
located_in plant-type vacuole PubMed 
located_in plasma membrane PubMed 

General protein information

Preferred Names
germin-like protein 9
NP_193199.1
  • germin-like protein 9 (GLP9); FUNCTIONS IN: manganese ion binding, nutrient reservoir activity; INVOLVED IN: response to salt stress; LOCATED IN: extracellular region, plasma membrane, plant-type vacuole; EXPRESSED IN: stem, hypocotyl, sepal, root, stamen; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Cupin, RmlC-type (InterPro:IPR011051), Cupin 1 (InterPro:IPR006045), Germin (InterPro:IPR001929), RmlC-like jelly roll fold (InterPro:IPR014710), Germin, manganese binding site (InterPro:IPR019780); BEST Arabidopsis thaliana protein match is: RmlC-like cupins superfamily protein (TAIR:AT5G39110.1); Has 1524 Blast hits to 1518 proteins in 95 species: Archae - 0; Bacteria - 12; Metazoa - 0; Fungi - 42; Plants - 1455; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003075.7 Reference assembly

    Range
    8392825..8393860
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_117545.4 → NP_193199.1  germin-like protein 9 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_193199.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    O23319, Q9LEA7
    UniProtKB/TrEMBL
    A0A654FPN6, Q56XY5
    Conserved Domains (1) summary
    pfam00190
    Location:65 → 216
    Cupin_1; Cupin
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