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emb2739 embryo defective 2739 [ Arabidopsis thaliana (thale cress) ]

Gene ID: 827107, updated on 18-Sep-2024

Summary

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Official Symbol
emb2739
Official Full Name
embryo defective 2739
Primary source
TAIR:AT4G14590
Locus tag
AT4G14590
See related
Araport:AT4G14590
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
DL3335W; embryo defective 2739; FCAALL.260
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Genomic context

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See emb2739 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
2
Sequence:
Chromosome: 4; NC_003075.7 (8374391..8376353)

Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene CBL-interacting protein kinase 4 Neighboring gene ncRNA Neighboring gene Target SNARE coiled-coil domain protein Neighboring gene Mitochondrial transcription termination factor family protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003075.7

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana. Mayer K, et al. Nature, 1999 Dec 16. PMID 10617198

GeneRIFs: Gene References Into Functions

General gene information

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NM_117539.2

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
acts_upstream_of_or_within embryo development ending in seed dormancy NAS
Non-traceable Author Statement
more info
  
Component Evidence Code Pubs
located_in nucleus ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
embryo defective 2739
NP_193195.1
  • embryo defective 2739 (emb2739); CONTAINS InterPro DOMAIN/s: Integrator complex, subunit 3 (InterPro:IPR019333); Has 179 Blast hits to 170 proteins in 63 species: Archae - 0; Bacteria - 0; Metazoa - 131; Fungi - 0; Plants - 37; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003075.7 Reference assembly

    Range
    8374391..8376353
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_117539.2 → NP_193195.1  embryo defective 2739 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_193195.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A654FP80, O23315
    Conserved Domains (1) summary
    pfam10189
    Location:224 → 440
    DUF2356; Conserved protein (DUF2356)
Nucleotide Protein
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