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histone acetyltransferase subunit NuA4-domain protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 827083, updated on 18-Sep-2024

Summary

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Official Full Name
histone acetyltransferase subunit NuA4-domain protein
Primary source
TAIR:AT4G14385
Locus tag
AT4G14385
See related
Araport:AT4G14385
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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Genomic context

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Location:
chromosome: 4
Exon count:
5
Sequence:
Chromosome: 4; NC_003075.7 (8286745..8288952, complement)

Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene Regulator of chromosome condensation (RCC1) family protein Neighboring gene Disease resistance protein (TIR-NBS-LRR class) family Neighboring gene cotton fiber protein Neighboring gene Ankyrin repeat family protein Neighboring gene ankyrin repeat family protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003075.7

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. NuA4 and H2A.Z control environmental responses and autotrophic growth in Arabidopsis. Bieluszewski T, et al. Nat Commun, 2022 Jan 12. PMID 35022409, Free PMC Article
  2. The Arabidopsis NuA4 histone acetyltransferase complex is required for chlorophyll biosynthesis and photosynthesis. Zhou JX, et al. J Integr Plant Biol, 2022 Apr. PMID 35043580
  3. The PEAT protein complexes are required for histone deacetylation and heterochromatin silencing. Tan LM, et al. EMBO J, 2018 Oct 1. PMID 30104406, Free PMC Article
  4. AtEAF1 is a potential platform protein for Arabidopsis NuA4 acetyltransferase complex. Bieluszewski T, et al. BMC Plant Biol, 2015 Mar 5. PMID 25849764, Free PMC Article
  5. Identification and dynamics of Arabidopsis adaptor protein-2 complex and its involvement in floral organ development. Yamaoka S, et al. Plant Cell, 2013 Aug. PMID 23975897, Free PMC Article

See all (8) citations in PubMed

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. NuA4 and H2A.Z control environmental responses and autotrophic growth in Arabidopsis.
    Title: NuA4 and H2A.Z control environmental responses and autotrophic growth in Arabidopsis.
Submit: New GeneRIF Correction

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

NM_001340928.1
NM_001340929.1
NM_001340930.1
NM_001340931.1
NM_117517.4
NM_202817.2
NM_202818.3

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
Component Evidence Code Pubs
part_of NuA4 histone acetyltransferase complex IDA
Inferred from Direct Assay
more info
 PubMed 
located_in nucleus ISM
Inferred from Sequence Model
more info
  
located_in plant-type vacuole HDA PubMed 

General protein information

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Preferred Names
histone acetyltransferase subunit NuA4-domain protein
NP_567429.1
  • FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Histone H4 acetyltransferase, NuA4 complex, Eaf6 (InterPro:IPR015418); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
NP_974546.1
  • FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Histone H4 acetyltransferase, NuA4 complex, Eaf6 (InterPro:IPR015418); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
NP_974547.1
  • FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Histone H4 acetyltransferase, NuA4 complex, Eaf6 (InterPro:IPR015418); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003075.7 Reference assembly

    Range
    8286745..8288952 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001340927.1 → NP_001328484.1  histone acetyltransferase subunit NuA4-domain protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178UVA4, A0A1P8B4S3

  2. NM_001340926.1 → NP_001328483.1  histone acetyltransferase subunit NuA4-domain protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178UU01, F4JVF3

  3. NM_117517.4 → NP_567429.1  histone acetyltransferase subunit NuA4-domain protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_567429.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A654FP91, Q93VF4
    Conserved Domains (1) summary
    pfam09340
    Location:14 → 91
    NuA4; Histone acetyltransferase subunit NuA4

  4. NM_202817.2 → NP_974546.1  histone acetyltransferase subunit NuA4-domain protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_974546.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    B9DG35
    Conserved Domains (1) summary
    pfam09340
    Location:14 → 91
    NuA4; Histone acetyltransferase subunit NuA4

  5. NM_001340931.1 → NP_001328480.1  histone acetyltransferase subunit NuA4-domain protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178UVA4, A0A1P8B4S3

  6. NM_001340930.1 → NP_001328479.1  histone acetyltransferase subunit NuA4-domain protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178UU01, F4JVF3

  7. NM_001340929.1 → NP_001328482.1  histone acetyltransferase subunit NuA4-domain protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178UU01, F4JVF3

  8. NM_001340928.1 → NP_001328481.1  histone acetyltransferase subunit NuA4-domain protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178UU01, F4JVF3

  9. NM_202818.3 → NP_974547.1  histone acetyltransferase subunit NuA4-domain protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_974547.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178UU01, F4JVF3
    Conserved Domains (1) summary
    pfam09340
    Location:13 → 88
    NuA4; Histone acetyltransferase subunit NuA4
Nucleotide Protein
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