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zein-binding protein (Protein of unknown function, DUF593) [ Arabidopsis thaliana (thale cress) ]

Gene ID: 826997, updated on 18-Sep-2024

Summary

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Official Full Name
zein-binding protein (Protein of unknown function, DUF593)
Primary source
TAIR:AT4G13630
Locus tag
AT4G13630
See related
Araport:AT4G13630
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
F18A5.20; F18A5_20
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Genomic context

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Location:
chromosome: 4
Exon count:
4
Sequence:
Chromosome: 4; NC_003075.7 (7933684..7936565, complement)

Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene Uncharacterized protein family SERF Neighboring gene Integrase-type DNA-binding superfamily protein Neighboring gene Homeodomain-like superfamily protein Neighboring gene Pentatricopeptide repeat (PPR) superfamily protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003075.7

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana. Mayer K, et al. Nature, 1999 Dec 16. PMID 10617198

GeneRIFs: Gene References Into Functions

General gene information

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NM_001203790.2
NM_001340870.1

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
Component Evidence Code Pubs
located_in nucleus ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
zein-binding protein (Protein of unknown function, DUF593)
NP_001190719.1
  • Protein of unknown function, DUF593; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF593 (InterPro:IPR007656); BEST Arabidopsis thaliana protein match is: Protein of unknown function, DUF593 (TAIR:AT1G04890.1).
NP_001319921.1
  • Protein of unknown function, DUF593; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF593 (InterPro:IPR007656); BEST Arabidopsis thaliana protein match is: Protein of unknown function, DUF593 (TAIR:AT1G04890.1); Has 608 Blast hits to 585 proteins in 84 species: Archae - 0; Bacteria - 9; Metazoa - 158; Fungi - 22; Plants - 359; Viruses - 2; Other Eukaryotes - 58 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003075.7 Reference assembly

    Range
    7933684..7936565 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001203790.2 → NP_001190719.1  zein-binding protein (Protein of unknown function, DUF593) [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_001190719.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    F4JT43, Q9SVP9
    Conserved Domains (1) summary
    pfam04576
    Location:226 → 314
    Zein-binding; Zein-binding

  2. NM_001340870.1 → NP_001319921.1  zein-binding protein (Protein of unknown function, DUF593) [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    F4JT43, Q9SVP9
    Conserved Domains (1) summary
    pfam04576
    Location:226 → 314
    Zein-binding; Zein-binding
Nucleotide Protein
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