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uncharacterized protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 826929, updated on 18-Sep-2024

Summary

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Official Full Name
uncharacterized protein
Primary source
TAIR:AT4G13150
Locus tag
AT4G13150
See related
Araport:AT4G13150
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
F17N18.40; F17N18_40
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Genomic context

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Location:
chromosome: 4
Exon count:
10
Sequence:
Chromosome: 4; NC_003075.7 (7650053..7652289, complement)

Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene pseudo Neighboring gene Cysteine/Histidine-rich C1 domain family protein Neighboring gene zein-binding protein (Protein of unknown function, DUF593) Neighboring gene Ribosomal protein L13 family protein Neighboring gene NAD(P)-binding Rossmann-fold superfamily protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003075.7

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Global Analysis of Membrane-associated Protein Oligomerization Using Protein Correlation Profiling. McBride Z, et al. Mol Cell Proteomics, 2017 Nov. PMID 28887381, Free PMC Article
  2. Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana. Mayer K, et al. Nature, 1999 Dec 16. PMID 10617198

GeneRIFs: Gene References Into Functions

General gene information

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NM_001340836.1
NM_001340837.1
NM_001340838.1
NM_001340839.1
NM_117384.5

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
Component Evidence Code Pubs
located_in chloroplast ISM
Inferred from Sequence Model
more info
  
located_in cytosol HDA PubMed 

General protein information

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Preferred Names
uncharacterized protein
NP_193051.4
  • unknown protein; Has 83 Blast hits to 82 proteins in 37 species: Archae - 0; Bacteria - 51; Metazoa - 0; Fungi - 0; Plants - 30; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003075.7 Reference assembly

    Range
    7650053..7652289 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_117384.5 → NP_193051.4  uncharacterized protein AT4G13150 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_193051.4

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A5S9XSM4, F4JS93
    Conserved Domains (1) summary
    cl00429
    Location:193 → 303
    SNARE_assoc; SNARE associated Golgi protein

  2. NM_001340836.1 → NP_001328645.1  uncharacterized protein AT4G13150 [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178V4F4, A0A1P8B589

  3. NM_001340837.1 → NP_001328644.1  uncharacterized protein AT4G13150 [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178V4F4, A0A1P8B5B1

  4. NM_001340838.1 → NP_001328643.1  uncharacterized protein AT4G13150 [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178V4F4, A0A1P8B584

  5. NM_001340839.1 → NP_001328642.1  uncharacterized protein AT4G13150 [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178V4F4, A0A1P8B584
Nucleotide Protein
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