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Copper amine oxidase family protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 826835, updated on 18-Sep-2024

Summary

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Official Full Name
Copper amine oxidase family protein
Primary source
TAIR:AT4G12270
Locus tag
AT4G12270
See related
Araport:AT4G12270
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
T4C9.110; T4C9_110
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Genomic context

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Location:
chromosome: 4
Exon count:
3
Sequence:
Chromosome: 4; NC_003075.7 (7297765..7299930)

Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene pseudo Neighboring gene ncRNA Neighboring gene pseudo Neighboring gene copper amine oxidase family protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003075.7

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana. Mayer K, et al. Nature, 1999 Dec 16. PMID 10617198

GeneRIFs: Gene References Into Functions

General gene information

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NM_117297.2

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables aliphatic amine oxidase activity IEA
Inferred from Electronic Annotation
more info
  
enables copper ion binding IEA
Inferred from Electronic Annotation
more info
  
enables primary methylamine oxidase activity IEA
Inferred from Electronic Annotation
more info
  
enables quinone binding IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in extracellular region ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
Copper amine oxidase family protein
NP_192964.1
  • Copper amine oxidase family protein; FUNCTIONS IN: quinone binding, primary amine oxidase activity, copper ion binding; INVOLVED IN: oxidation reduction, amine metabolic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Copper amine oxidase, N-terminal (InterPro:IPR016182), Copper amine oxidase, N2-terminal (InterPro:IPR015800), Copper amine oxidase, N2/N3-terminal (InterPro:IPR015801), Copper amine oxidase, N3-terminal (InterPro:IPR015802), Copper amine oxidase (InterPro:IPR000269), Copper amine oxidase, C-terminal (InterPro:IPR015798); BEST Arabidopsis thaliana protein match is: Copper amine oxidase family protein (TAIR:AT4G12290.1); Has 1119 Blast hits to 1117 proteins in 236 species: Archae - 14; Bacteria - 358; Metazoa - 19; Fungi - 372; Plants - 223; Viruses - 0; Other Eukaryotes - 133 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003075.7 Reference assembly

    Range
    7297765..7299930
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_117297.2 → NP_192964.1  Copper amine oxidase family protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_192964.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A654FNE1, Q9STI4
    Conserved Domains (3) summary
    pfam01179
    Location:305 → 456
    Cu_amine_oxid; Copper amine oxidase, enzyme domain
    pfam02727
    Location:84 → 170
    Cu_amine_oxidN2; Copper amine oxidase, N2 domain
    pfam02728
    Location:177 → 277
    Cu_amine_oxidN3; Copper amine oxidase, N3 domain
Nucleotide Protein
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