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MTSSB mitochondrially targeted single-stranded DNA binding protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 826707, updated on 18-Sep-2024

Summary

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Official Symbol
MTSSB
Official Full Name
mitochondrially targeted single-stranded DNA binding protein
Primary source
TAIR:AT4G11060
Locus tag
AT4G11060
See related
Araport:AT4G11060
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
mitochondrially targeted single-stranded DNA binding protein; T22B4.40; T22B4_40
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Genomic context

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See MTSSB in Genome Data Viewer
Location:
chromosome: 4
Exon count:
7
Sequence:
Chromosome: 4; NC_003075.7 (6754515..6756595, complement)

Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene Protein phosphatase 2C family protein Neighboring gene glycosyl hydrolase 9C3 Neighboring gene WRKY family transcription factor Neighboring gene HMG (high mobility group) box protein Neighboring gene ncRNA

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003075.7

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Arabidopsis SSB1, a Mitochondrial Single-Stranded DNA-Binding Protein, is Involved in ABA Response and Mitochondrial RNA Splicing. Qian J, et al. Plant Cell Physiol, 2021 Nov 10. PMID 34185867
  2. Characterization of a mitochondrially targeted single-stranded DNA-binding protein in Arabidopsis thaliana. Edmondson AC, et al. Mol Genet Genomics, 2005 Apr. PMID 15744502
  3. Arabidopsis thaliana organelles mimic the T7 phage DNA replisome with specific interactions between Twinkle protein and DNA polymerases Pol1A and Pol1B. Morley SA, et al. BMC Plant Biol, 2019 Jun 6. PMID 31170927, Free PMC Article
  4. Plant organellar DNA polymerases repair double-stranded breaks by microhomology-mediated end-joining. García-Medel PL, et al. Nucleic Acids Res, 2019 Apr 8. PMID 30698803, Free PMC Article
  5. Telomerase Interaction Partners-Insight from Plants. Fulnečková J, et al. Int J Mol Sci, 2021 Dec 29. PMID 35008793, Free PMC Article

See all (9) citations in PubMed

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. may play a role in mitochondrial DNA recombination
    Title: Characterization of a mitochondrially targeted single-stranded DNA-binding protein in Arabidopsis thaliana.
Submit: New GeneRIF Correction

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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NM_117176.3

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables mRNA binding IDA
Inferred from Direct Assay
more info
 PubMed 
enables protein binding IPI
Inferred from Physical Interaction
more info
 PubMed 
enables single-stranded DNA binding IDA
Inferred from Direct Assay
more info
 PubMed 
Process Evidence Code Pubs
involved_in DNA replication IEA
Inferred from Electronic Annotation
more info
  
acts_upstream_of_or_within mitochondrial mRNA processing IMP
Inferred from Mutant Phenotype
more info
 PubMed 
Component Evidence Code Pubs
located_in chloroplast ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
mitochondrially targeted single-stranded DNA binding protein
NP_192844.2
  • mitochondrially targeted single-stranded DNA binding protein (MTSSB); FUNCTIONS IN: single-stranded DNA binding; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold (InterPro:IPR012340), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Primosome PriB/single-strand DNA-binding (InterPro:IPR000424); BEST Arabidopsis thaliana protein match is: Nucleic acid-binding, OB-fold-like protein (TAIR:AT3G18580.1); Has 3842 Blast hits to 3842 proteins in 1060 species: Archae - 0; Bacteria - 2446; Metazoa - 112; Fungi - 0; Plants - 68; Viruses - 25; Other Eukaryotes - 1191 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003075.7 Reference assembly

    Range
    6754515..6756595 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_117176.3 → NP_192844.2  mitochondrially targeted single-stranded DNA binding protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_192844.2

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    O82512, Q84J78, Q9T011
    UniProtKB/TrEMBL
    A0A178V0I9, A0A654FN52, Q546B8
    Conserved Domains (1) summary
    pfam00436
    Location:71 → 175
    SSB; Single-strand binding protein family
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q84J78.1

Gene LinkOut

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