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FBD / Leucine Rich Repeat domains containing protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 826634, updated on 18-Sep-2024

Summary

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Official Full Name
FBD / Leucine Rich Repeat domains containing protein
Primary source
TAIR:AT4G10420
Locus tag
AT4G10420
See related
Araport:AT4G10420
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
F7L13.3
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Genomic context

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Location:
chromosome: 4
Exon count:
3
Sequence:
Chromosome: 4; NC_003075.7 (6452811..6454209, complement)

Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene Leucine-rich repeat (LRR) family protein Neighboring gene miscRNA Neighboring gene TMPIT-like protein Neighboring gene S-adenosyl-L-methionine-dependent methyltransferases superfamily protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003075.7

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana. Mayer K, et al. Nature, 1999 Dec 16. PMID 10617198

GeneRIFs: Gene References Into Functions

General gene information

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Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
  

General protein information

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Preferred Names
FBD / Leucine Rich Repeat domains containing protein
NP_192780.4
  • FBD / Leucine Rich Repeat domains containing protein; CONTAINS InterPro DOMAIN/s: FBD (InterPro:IPR013596), FBD-like (InterPro:IPR006566), Leucine-rich repeat 2 (InterPro:IPR013101); BEST Arabidopsis thaliana protein match is: F-box/RNI-like/FBD-like domains-containing protein (TAIR:AT4G10400.2); Has 1022 Blast hits to 997 proteins in 23 species: Archae - 0; Bacteria - 14; Metazoa - 18; Fungi - 0; Plants - 987; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003075.7 Reference assembly

    Range
    6452811..6454209 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_117110.5 → NP_192780.4  FBD / Leucine Rich Repeat domains containing protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_192780.4

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A5S9XR22, F4JLN7
    Conserved Domains (3) summary
    smart00579
    Location:252 → 322
    FBD; domain in FBox and BRCT domain containing plant proteins
    sd00032
    Location:38 → 59
    LRR_2; leucine-rich repeat [structural motif]
    pfam07723
    Location:59 → 84
    LRR_2; Leucine Rich Repeat
Nucleotide Protein
Heading Accession and Version

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