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Oxidoreductase family protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 826553, updated on 18-Sep-2024

Summary

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Official Full Name
Oxidoreductase family protein
Primary source
TAIR:AT4G09670
Locus tag
AT4G09670
See related
Araport:AT4G09670
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
F17A8.20; F17A8_20
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Genomic context

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Location:
chromosome: 4
Exon count:
2
Sequence:
Chromosome: 4; NC_003075.7 (6107112..6109176, complement)

Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene F-type H+-transporting ATPase subunit delta Neighboring gene zinc finger MYM-type-like protein Neighboring gene conserved telomere maintenance component 1 Neighboring gene Cysteine/Histidine-rich C1 domain family protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003075.7

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A proteomic strategy for global analysis of plant protein complexes. Aryal UK, et al. Plant Cell, 2014 Oct. PMID 25293756, Free PMC Article
  2. Global Analysis of Membrane-associated Protein Oligomerization Using Protein Correlation Profiling. McBride Z, et al. Mol Cell Proteomics, 2017 Nov. PMID 28887381, Free PMC Article
  3. Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana. Mayer K, et al. Nature, 1999 Dec 16. PMID 10617198

GeneRIFs: Gene References Into Functions

General gene information

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NM_117035.4

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables nucleotide binding IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
Component Evidence Code Pubs
located_in cytosol HDA PubMed 

General protein information

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Preferred Names
Oxidoreductase family protein
NP_192705.1
  • Oxidoreductase family protein; FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity; INVOLVED IN: oxidation reduction, metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Oxidoreductase, N-terminal (InterPro:IPR000683), Oxidoreductase, C-terminal (InterPro:IPR004104), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: Glyceraldehyde-3-phosphate dehydrogenase-like family protein (TAIR:AT1G34200.1); Has 17148 Blast hits to 17147 proteins in 2160 species: Archae - 344; Bacteria - 12203; Metazoa - 250; Fungi - 605; Plants - 99; Viruses - 0; Other Eukaryotes - 3647 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003075.7 Reference assembly

    Range
    6107112..6109176 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_117035.4 → NP_192705.1  Oxidoreductase family protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_192705.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q56ZU4, Q94AR5, Q9SZ83
    UniProtKB/TrEMBL
    A0A178UWI8, A0A5S9XQR9
    Conserved Domains (2) summary
    COG0673
    Location:6 → 351
    MviM; Predicted dehydrogenase [General function prediction only]
    pfam01408
    Location:7 → 126
    GFO_IDH_MocA; Oxidoreductase family, NAD-binding Rossmann fold
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9SZ83.1

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