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GASA3 GAST1 protein homolog 3 [ Arabidopsis thaliana (thale cress) ]

Gene ID: 826545, updated on 18-Sep-2024

Summary

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Official Symbol
GASA3
Official Full Name
GAST1 protein homolog 3
Primary source
TAIR:AT4G09600
Locus tag
AT4G09600
See related
Araport:AT4G09600
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
GAST1 protein homolog 3; T25P22.40; T25P22_40
Summary
One of GASA gene family which is related to a GA-stimulated transcript (GAST) from tomato.
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Genomic context

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See GASA3 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
3
Sequence:
Chromosome: 4; NC_003075.7 (6072804..6073646, complement)

Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene NDR1/HIN1-like 22 Neighboring gene pseudo Neighboring gene GAST1 protein homolog 2 Neighboring gene Mitochondrial transcription termination factor family protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003075.7

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. GASA, a gibberellin-regulated gene family from Arabidopsis thaliana related to the tomato GAST1 gene. Herzog M, et al. Plant Mol Biol, 1995 Feb. PMID 7727751
  2. Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana. Mayer K, et al. Nature, 1999 Dec 16. PMID 10617198

GeneRIFs: Gene References Into Functions

General gene information

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Homology

NM_117028.4

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
acts_upstream_of_or_within response to gibberellin TAS
Traceable Author Statement
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular region ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
GAST1 protein homolog 3
NP_192698.1
  • GAST1 protein homolog 3 (GASA3); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to gibberellin stimulus; LOCATED IN: endomembrane system; EXPRESSED IN: fruit, seed, leaf; EXPRESSED DURING: LP.04 four leaves visible; CONTAINS InterPro DOMAIN/s: Gibberellin regulated protein (InterPro:IPR003854); BEST Arabidopsis thaliana protein match is: GAST1 protein homolog 2 (TAIR:AT4G09610.1); Has 469 Blast hits to 469 proteins in 44 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 469; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003075.7 Reference assembly

    Range
    6072804..6073646 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_117028.4 → NP_192698.1  GAST1 protein homolog 3 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_192698.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    P46687
    UniProtKB/TrEMBL
    A0A5S9XQR0, A0A654FMN1
    Conserved Domains (1) summary
    pfam02704
    Location:40 → 99
    GASA; Gibberellin regulated protein
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
P46687.1

Gene LinkOut

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