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ATPUP13 Drug/metabolite transporter superfamily protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 826438, updated on 18-Sep-2024

Summary

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Official Symbol
ATPUP13
Official Full Name
Drug/metabolite transporter superfamily protein
Primary source
TAIR:AT4G08700
Locus tag
AT4G08700
See related
Araport:AT4G08700
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
T32A17.10; T32A17_10
Summary
Member of a family of proteins related to PUP1, a purine transporter. May be involved in the transport of purine and purine derivatives such as cytokinins, across the plasma membrane.
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Genomic context

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See ATPUP13 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
2
Sequence:
Chromosome: 4; NC_003075.7 (5565773..5567458, complement)

Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene pseudo Neighboring gene miscRNA Neighboring gene pseudo Neighboring gene pseudo

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003075.7

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A new family of high-affinity transporters for adenine, cytosine, and purine derivatives in Arabidopsis. Gillissen B, et al. Plant Cell, 2000 Feb. PMID 10662864, Free PMC Article
  2. Uncovering Arabidopsis membrane protein interactome enriched in transporters using mating-based split ubiquitin assays and classification models. Chen J, et al. Front Plant Sci, 2012. PMID 22737156, Free PMC Article
  3. Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana. Mayer K, et al. Nature, 1999 Dec 16. PMID 10617198

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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NM_116940.2

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables purine nucleobase transmembrane transporter activity ISS
Inferred from Sequence or Structural Similarity
more info
  
enables purine nucleobase transmembrane transporter activity TAS
Traceable Author Statement
more info
 PubMed 
enables purine nucleoside transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
acts_upstream_of_or_within purine nucleobase transport TAS
Traceable Author Statement
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane TAS
Traceable Author Statement
more info
 PubMed 

General protein information

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Preferred Names
Drug/metabolite transporter superfamily protein
NP_567339.1
  • ATPUP13; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF250 (InterPro:IPR004853); BEST Arabidopsis thaliana protein match is: purine permease 12 (TAIR:AT5G41160.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003075.7 Reference assembly

    Range
    5565773..5567458 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_116940.2 → NP_567339.1  Drug/metabolite transporter superfamily protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_567339.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q8RY83, Q9LDT1
    UniProtKB/TrEMBL
    A0A178UWP4
    Conserved Domains (1) summary
    pfam16913
    Location:36 → 351
    PUNUT; Purine nucleobase transmembrane transport
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q8RY83.1

Gene LinkOut

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