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ATP binding protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 826429, updated on 18-Sep-2024

Summary

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Official Full Name
ATP binding protein
Primary source
TAIR:AT4G08640
Locus tag
AT4G08640
See related
Araport:AT4G08640
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
T3F12.5; T3F12_5
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Genomic context

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Location:
chromosome: 4
Exon count:
4
Sequence:
Chromosome: 4; NC_003075.7 (5513313..5514174)

Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene sulfate transporter 1;1 Neighboring gene fas-binding factor-like protein Neighboring gene miscRNA Neighboring gene pseudo

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003075.7

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A Pan-plant Protein Complex Map Reveals Deep Conservation and Novel Assemblies. McWhite CD, et al. Cell, 2020 Apr 16. PMID 32191846, Free PMC Article
  2. Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana. Mayer K, et al. Nature, 1999 Dec 16. PMID 10617198

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
Component Evidence Code Pubs
located_in cytoplasm ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
ATP binding protein
NP_192604.2
  • ATP binding; FUNCTIONS IN: ATP binding; INVOLVED IN: cellular protein metabolic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Chaperonin Cpn60/TCP-1 (InterPro:IPR002423); BEST Arabidopsis thaliana protein match is: TCP-1/cpn60 chaperonin family protein (TAIR:AT3G03960.1); Has 422 Blast hits to 422 proteins in 215 species: Archae - 0; Bacteria - 0; Metazoa - 162; Fungi - 127; Plants - 52; Viruses - 0; Other Eukaryotes - 81 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003075.7 Reference assembly

    Range
    5513313..5514174
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_116933.2 → NP_192604.2  ATP binding protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_192604.2

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A654FMG8, F4JIB7
    Conserved Domains (1) summary
    cl02777
    Location:2 → 139
    chaperonin_like; chaperonin_like superfamily. Chaperonins are involved in productive folding of proteins. They share a common general morphology, a double toroid of 2 stacked rings, each composed of 7-9 subunits. There are 2 main chaperonin groups. The symmetry of type I ...
Nucleotide Protein
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