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microfibrillar-associated protein-like protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 826419, updated on 18-Sep-2024

Summary

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Official Full Name
microfibrillar-associated protein-like protein
Primary source
TAIR:AT4G08580
Locus tag
AT4G08580
See related
Araport:AT4G08580
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
T3F12.11
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Genomic context

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Location:
chromosome: 4
Exon count:
3
Sequence:
Chromosome: 4; NC_003075.7 (5461398..5463907)

Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene pumilio 15 Neighboring gene Heavy metal transport/detoxification superfamily protein Neighboring gene ORTHRUS-like protein Neighboring gene uncharacterized protein Neighboring gene pseudo

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003075.7

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sorting signals, N-terminal modifications and abundance of the chloroplast proteome. Zybailov B, et al. PLoS One, 2008 Apr 23. PMID 18431481, Free PMC Article
  2. Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana. Mayer K, et al. Nature, 1999 Dec 16. PMID 10617198

GeneRIFs: Gene References Into Functions

General gene information

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Homology

NM_001340596.1
NM_116927.5

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Component Evidence Code Pubs
located_in chloroplast HDA PubMed 
located_in extracellular region ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
microfibrillar-associated protein-like protein
NP_192598.1
  • microfibrillar-associated protein-related; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Micro-fibrillar-associated 1, C-terminal (InterPro:IPR009730); BEST Arabidopsis thaliana protein match is: microfibrillar-associated protein-related (TAIR:AT5G17900.1); Has 41823 Blast hits to 26074 proteins in 1611 species: Archae - 271; Bacteria - 4310; Metazoa - 18112; Fungi - 3731; Plants - 1727; Viruses - 240; Other Eukaryotes - 13432 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003075.7 Reference assembly

    Range
    5461398..5463907
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_116927.5 → NP_192598.1  microfibrillar-associated protein-like protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_192598.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178V589, A0A384KUA2, C0Z3G2, O22281
    Conserved Domains (1) summary
    pfam06991
    Location:173 → 393
    MFAP1; Microfibril-associated/Pre-mRNA processing

  2. NM_001340596.1 → NP_001328706.1  microfibrillar-associated protein-like protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178V589, A0A384KUA2, C0Z3G2, O22281
    Conserved Domains (1) summary
    pfam06991
    Location:173 → 393
    MFAP1; Microfibril-associated/Pre-mRNA processing
Nucleotide Protein
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