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hypothetical protein (DUF3287) [ Arabidopsis thaliana (thale cress) ]

Gene ID: 826252, updated on 18-Sep-2024

Summary

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Official Full Name
hypothetical protein (DUF3287)
Primary source
TAIR:AT4G07740
Locus tag
AT4G07740
See related
Araport:AT4G07740
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
T6L9.5; T6L9_5
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Genomic context

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Location:
chromosome: 4
Exon count:
4
Sequence:
Chromosome: 4; NC_003075.7 (4539638..4540682)

Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene pseudo Neighboring gene pseudo Neighboring gene pseudo Neighboring gene pseudo

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003075.7

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana. Mayer K, et al. Nature, 1999 Dec 16. PMID 10617198

GeneRIFs: Gene References Into Functions

General gene information

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Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
  

General protein information

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Preferred Names
hypothetical protein (DUF3287)
NP_192517.1
  • Protein of unknown function (DUF3287); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3287 (InterPro:IPR021704); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF3287) (TAIR:AT5G35603.2); Has 32 Blast hits to 32 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 32; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003075.7 Reference assembly

    Range
    4539638..4540682
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_116847.1 → NP_192517.1  hypothetical protein (DUF3287) [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_192517.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q9XH18
    Conserved Domains (1) summary
    pfam11690
    Location:14 → 103
    DUF3287; Protein of unknown function (DUF3287)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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