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LOC8260594 oxygen-evolving enhancer protein 1, chloroplastic [ Ricinus communis (castor bean) ]

Gene ID: 8260594, updated on 30-Nov-2023

Summary

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Gene symbol
LOC8260594
Gene description
oxygen-evolving enhancer protein 1, chloroplastic
Locus tag
RCOM_0603960
Gene type
protein coding
RefSeq status
MODEL
Organism
Ricinus communis
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Acalyphoideae; Acalypheae; Ricinus
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Genomic context

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See LOC8260594 in Genome Data Viewer
Location:
chromosome: 7
Exon count:
2
Annotation release Status Assembly Chr Location
102 current ASM1957865v1 (GCF_019578655.1) 7 NC_063262.1 (2251614..2253426, complement)
101 previous assembly JCVI_RCG_1.1 (GCF_000151685.1) Unplaced Scaffold NW_002994396.1 (531566..533426)

Chromosome 7 - NC_063262.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC125370725 Neighboring gene CASP-like protein 5C3 Neighboring gene transfer RNA isoleucine (anticodon AAU) Neighboring gene small nucleolar RNA SNOR75

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables oxygen evolving activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in photosystem II assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in photosystem II stabilization IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of photosystem II oxygen evolving complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
oxygen-evolving enhancer protein 1, chloroplastic

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Ricinus communis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1957865v1

Genomic

  1. NC_063262.1 Reference ASM1957865v1

    Range
    2251614..2253426 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002522340.4 → XP_002522386.1  oxygen-evolving enhancer protein 1, chloroplastic

    See identical proteins and their annotated locations for XP_002522386.1

    UniProtKB/TrEMBL
    B9S8R7
    Conserved Domains (1) summary
    PLN00037
    Location:21 → 333
    PLN00037; photosystem II oxygen-evolving enhancer protein 1; Provisional
Nucleotide Protein
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