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RLP46 receptor like protein 46 [ Arabidopsis thaliana (thale cress) ]

Gene ID: 825737, updated on 18-Sep-2024

Summary

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Official Symbol
RLP46
Official Full Name
receptor like protein 46
Primary source
TAIR:AT4G04220
Locus tag
AT4G04220
See related
Araport:AT4G04220
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
AtRLP46; receptor like protein 46; T27D20.9; T27D20_9
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Genomic context

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See RLP46 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
2
Sequence:
Chromosome: 4; NC_003075.7 (2033168..2035946)

Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene Microsomal signal peptidase 25 kDa subunit (SPC25) Neighboring gene plant UBX domain containing protein 4 Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene pseudo

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003075.7

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The leucine-rich repeat as a protein recognition motif. Kobe B, et al. Curr Opin Struct Biol, 2001 Dec. PMID 11751054
  2. Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana. Mayer K, et al. Nature, 1999 Dec 16. PMID 10617198

GeneRIFs: Gene References Into Functions

General gene information

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NM_116660.3

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables kinase activity ISS
Inferred from Sequence or Structural Similarity
more info
  
Process Evidence Code Pubs
acts_upstream_of_or_within signal transduction IC
Inferred by Curator
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
receptor like protein 46
NP_192331.2
  • receptor like protein 46 (RLP46); FUNCTIONS IN: kinase activity; INVOLVED IN: signal transduction, defense response; LOCATED IN: endomembrane system; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat, typical subtype (InterPro:IPR003591), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: receptor like protein 12 (TAIR:AT1G71400.1); Has 134299 Blast hits to 33174 proteins in 1147 species: Archae - 55; Bacteria - 10381; Metazoa - 36724; Fungi - 1470; Plants - 75311; Viruses - 4; Other Eukaryotes - 10354 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003075.7 Reference assembly

    Range
    2033168..2035946
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_116660.3 → NP_192331.2  receptor like protein 46 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_192331.2

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    F4JGB6, O81455
    UniProtKB/TrEMBL
    A0A5S9XQU3
    Conserved Domains (2) summary
    sd00033
    Location:110 → 131
    LRR_RI; leucine-rich repeat [structural motif]
    cl26793
    Location:20 → 589
    PLN00113; leucine-rich repeat receptor-like protein kinase; Provisional
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
F4JGB6.1

Gene LinkOut

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