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Pectinacetylesterase family protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 825379, updated on 18-Sep-2024

Summary

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Official Full Name
Pectinacetylesterase family protein
Primary source
TAIR:AT3G62060
Locus tag
AT3G62060
See related
Araport:AT3G62060
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
PAE6; pectin acetylesterase 6
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Genomic context

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Location:
chromosome: 3
Exon count:
13
Sequence:
Chromosome: 3; NC_003074.8 (22979848..22983250)

Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene rotamase CYP 4 Neighboring gene Haloacid dehalogenase-like hydrolase (HAD) superfamily protein Neighboring gene Putative endonuclease or glycosyl hydrolase Neighboring gene uncharacterized protein Neighboring gene SNF7 family protein Neighboring gene ncRNA

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003074.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

GeneRIFs: Gene References Into Functions

General gene information

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NM_116071.5

Gene Ontology Provided by TAIR

Component Evidence Code Pubs
located_in extracellular region ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
Pectinacetylesterase family protein
NP_191765.2
  • Pectinacetylesterase family protein; FUNCTIONS IN: carboxylesterase activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pectinacetylesterase (InterPro:IPR004963); BEST Arabidopsis thaliana protein match is: Pectinacetylesterase family protein (TAIR:AT2G46930.1); Has 544 Blast hits to 534 proteins in 92 species: Archae - 0; Bacteria - 38; Metazoa - 118; Fungi - 0; Plants - 304; Viruses - 0; Other Eukaryotes - 84 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003074.8 Reference assembly

    Range
    22979848..22983250
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001340136.1 → NP_001326878.1  Pectinacetylesterase family protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A1I9LQL7, A0A5S9XMZ5

  2. NM_116071.5 → NP_191765.2  Pectinacetylesterase family protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_191765.2

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q84JS1, Q9M1R8
    UniProtKB/TrEMBL
    A0A5S9XMZ5, A0A654FK13
    Conserved Domains (1) summary
    pfam03283
    Location:54 → 398
    PAE; Pectinacetylesterase
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q84JS1.1

Gene LinkOut

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