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CYP78A9 cytochrome p450 78a9 [ Arabidopsis thaliana (thale cress) ]

Gene ID: 825361, updated on 18-Sep-2024

Summary

Official Symbol
CYP78A9
Official Full Name
cytochrome p450 78a9
Primary source
TAIR:AT3G61880
Locus tag
AT3G61880
See related
Araport:AT3G61880
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
cytochrome p450 78a9
Summary
Encodes a cytochrome p450 monooxygenase. Overexpression of this gene allows fruit growth independently of fertilization. The gene is normally expressed only in floral organs(during the Arabidopsis stage 14 flower) and in the funiculus at anthesis.
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Genomic context

See CYP78A9 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
2
Sequence:
Chromosome: 3; NC_003074.8 (22905867..22907958, complement)

Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene RNA-binding (RRM/RBD/RNP motifs) family protein Neighboring gene plant/protein Neighboring gene homeobox 12 Neighboring gene miscRNA

Pathways from PubChem

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

NM_001203227.1
NM_116053.3

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables heme binding IEA
Inferred from Electronic Annotation
more info
 
enables iron ion binding IEA
Inferred from Electronic Annotation
more info
 
enables monooxygenase activity ISS
Inferred from Sequence or Structural Similarity
more info
PubMed 
enables oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEA
Inferred from Electronic Annotation
more info
 
enables protein binding IPI
Inferred from Physical Interaction
more info
PubMed 
Process Evidence Code Pubs
involved_in fruit development IGI
Inferred from Genetic Interaction
more info
PubMed 
acts_upstream_of_or_within fruit development IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in seed development IGI
Inferred from Genetic Interaction
more info
PubMed 
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
 

General protein information

Preferred Names
cytochrome p450 78a9
NP_001190156.1
  • cytochrome p450 78a9 (CYP78A9); FUNCTIONS IN: monooxygenase activity, oxygen binding; INVOLVED IN: fruit development; LOCATED IN: endomembrane system; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: 4 anthesis, flower development stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, conserved site (InterPro:IPR017972), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 78, subfamily A, polypeptide 6 (TAIR:AT2G46660.1).
NP_191747.1
  • cytochrome p450 78a9 (CYP78A9); FUNCTIONS IN: monooxygenase activity, oxygen binding; INVOLVED IN: fruit development; LOCATED IN: endomembrane system; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: 4 anthesis, flower development stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 78, subfamily A, polypeptide 6 (TAIR:AT2G46660.1); Has 32342 Blast hits to 32220 proteins in 1730 species: Archae - 48; Bacteria - 3539; Metazoa - 11622; Fungi - 6799; Plants - 9227; Viruses - 3; Other Eukaryotes - 1104 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003074.8 Reference assembly

    Range
    22905867..22907958 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_116053.3NP_191747.1  cytochrome p450 78a9 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_191747.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q8LBY2, Q9SLP1
    UniProtKB/TrEMBL
    A0A178V6J4, A0A5S9XMX4, A0A7G2EUL5
    Conserved Domains (1) summary
    cd11076
    Location:99522
    CYP78; cytochrome P450 family 78
  2. NM_001203227.1NP_001190156.1  cytochrome p450 78a9 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_001190156.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A5S9XMX4, A0A7G2EUL5, F4IX02
    Conserved Domains (1) summary
    cl12078
    Location:56529
    p450; Cytochrome P450