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ATG8G Ubiquitin-like superfamily protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 825235, updated on 18-Sep-2024

Summary

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Official Symbol
ATG8G
Official Full Name
Ubiquitin-like superfamily protein
Primary source
TAIR:AT3G60640
Locus tag
AT3G60640
See related
Araport:AT3G60640
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
AUTOPHAGY 8G
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Genomic context

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See ATG8G in Genome Data Viewer
Location:
chromosome: 3
Exon count:
6
Sequence:
Chromosome: 3; NC_003074.8 (22415751..22417548)

Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene GRAS family transcription factor Neighboring gene uncharacterized protein Neighboring gene spindle/kinetochore-associated-like protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003074.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. study shows that the overexpression of ATG8 genes provides beneficial effects on N management at the whole-plant level without affecting yield or plant biomass.
    Title: Overexpression of ATG8 in Arabidopsis Stimulates Autophagic Activity and Increases Nitrogen Remobilization Efficiency and Grain Filling.
Submit: New GeneRIF Correction

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

NM_115928.5

Gene Ontology Provided by TAIR

Component Evidence Code Pubs
located_in autophagosome IDA
Inferred from Direct Assay
more info
 PubMed 
located_in nucleus ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
Ubiquitin-like superfamily protein
NP_191623.1
  • AUTOPHAGY 8G (ATG8G); CONTAINS InterPro DOMAIN/s: Light chain 3 (LC3) (InterPro:IPR004241); BEST Arabidopsis thaliana protein match is: Ubiquitin-like superfamily protein (TAIR:AT4G16520.2); Has 1513 Blast hits to 1511 proteins in 273 species: Archae - 0; Bacteria - 0; Metazoa - 719; Fungi - 178; Plants - 302; Viruses - 3; Other Eukaryotes - 311 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003074.8 Reference assembly

    Range
    22415751..22417548
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_115928.5 → NP_191623.1  Ubiquitin-like superfamily protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_191623.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q9LZZ9
    UniProtKB/TrEMBL
    A0A178VL35, A0A5S9XMK6, A0A7G2EU98
    Conserved Domains (1) summary
    cd16128
    Location:12 → 114
    Ubl_ATG8; ubiquitin-like (Ubl) domain found in Saccharomyces cerevisiae Atg8p and related proteins; sub-family of the autophagy-related 8 (ATG8) family
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9LZZ9.1

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