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Zinc-binding dehydrogenase family protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 825154, updated on 18-Sep-2024

Summary

Official Full Name
Zinc-binding dehydrogenase family protein
Primary source
TAIR:AT3G59845
Locus tag
AT3G59845
See related
Araport:AT3G59845
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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Genomic context

Location:
chromosome: 3
Exon count:
5
Sequence:
Chromosome: 3; NC_003074.8 (22106243..22107939, complement)

Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene Integrin-linked protein kinase family Neighboring gene allyl alcohol dehydrogenase-like protein Neighboring gene Pectin lyase-like superfamily protein Neighboring gene pseudo

General gene information

NM_001084846.1
NM_115847.4

Gene Ontology Provided by TAIR

Process Evidence Code Pubs
acts_upstream_of_or_within response to oxidative stress IEP
Inferred from Expression Pattern
more info
PubMed 
Component Evidence Code Pubs
located_in cytoplasm ISM
Inferred from Sequence Model
more info
 

General protein information

Preferred Names
Zinc-binding dehydrogenase family protein
NP_001078315.1
  • Zinc-binding dehydrogenase family protein; FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity, zinc ion binding; INVOLVED IN: response to oxidative stress; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: GroES-like (InterPro:IPR011032), NAD(P)-binding domain (InterPro:IPR016040), Alcohol dehydrogenase, C-terminal (InterPro:IPR013149), Alcohol dehydrogenase superfamily, zinc-containing (InterPro:IPR002085); BEST Arabidopsis thaliana protein match is: Zinc-binding dehydrogenase family protein (TAIR:AT5G16990.1); Has 14802 Blast hits to 14786 proteins in 1767 species: Archae - 105; Bacteria - 8308; Metazoa - 744; Fungi - 1047; Plants - 497; Viruses - 0; Other Eukaryotes - 4101 (source: NCBI BLink).
NP_567087.1
  • Zinc-binding dehydrogenase family protein; FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity, zinc ion binding; INVOLVED IN: response to oxidative stress; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: GroES-like (InterPro:IPR011032), NAD(P)-binding domain (InterPro:IPR016040), Alcohol dehydrogenase, C-terminal (InterPro:IPR013149), Alcohol dehydrogenase superfamily, zinc-containing (InterPro:IPR002085); BEST Arabidopsis thaliana protein match is: Zinc-binding dehydrogenase family protein (TAIR:AT5G17000.1); Has 16333 Blast hits to 16305 proteins in 1827 species: Archae - 109; Bacteria - 9318; Metazoa - 826; Fungi - 1128; Plants - 582; Viruses - 0; Other Eukaryotes - 4370 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003074.8 Reference assembly

    Range
    22106243..22107939 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_115847.4NP_567087.1  Zinc-binding dehydrogenase family protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_567087.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178VH28, A0A654FJB7, Q8LC19, Q8LPM0
    Conserved Domains (1) summary
    cd08295
    Location:5345
    double_bond_reductase_like; Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase
  2. NM_001084846.1NP_001078315.1  Zinc-binding dehydrogenase family protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_001078315.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A8MQM0
    Conserved Domains (1) summary
    cl16912
    Location:2243
    MDR; Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family