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Rhodanese/Cell cycle control phosphatase superfamily protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 825147, updated on 18-Sep-2024

Summary

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Official Full Name
Rhodanese/Cell cycle control phosphatase superfamily protein
Primary source
TAIR:AT3G59780
Locus tag
AT3G59780
See related
Araport:AT3G59780
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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Genomic context

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Location:
chromosome: 3
Exon count:
14
Sequence:
Chromosome: 3; NC_003074.8 (22086333..22090529)

Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene sacI homology domain-containing protein / WW domain-containing protein Neighboring gene MAP kinase 10 Neighboring gene stress response protein Neighboring gene Small nuclear ribonucleoprotein family protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003074.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Analysis of the Arabidopsis nuclear proteome and its response to cold stress. Bae MS, et al. Plant J, 2003 Dec. PMID 14617066
  2. AT_CHLORO, a comprehensive chloroplast proteome database with subplastidial localization and curated information on envelope proteins. Ferro M, et al. Mol Cell Proteomics, 2010 Jun. PMID 20061580, Free PMC Article
  3. Sorting signals, N-terminal modifications and abundance of the chloroplast proteome. Zybailov B, et al. PLoS One, 2008 Apr 23. PMID 18431481, Free PMC Article
  4. Border control--a membrane-linked interactome of Arabidopsis. Jones AM, et al. Science, 2014 May 16. PMID 24833385
  5. Global Analysis of Membrane-associated Protein Oligomerization Using Protein Correlation Profiling. McBride Z, et al. Mol Cell Proteomics, 2017 Nov. PMID 28887381, Free PMC Article

See all (6) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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NM_115840.5

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in cellular response to calcium ion IEA
Inferred from Electronic Annotation
more info
  
involved_in de-etiolation IEA
Inferred from Electronic Annotation
more info
  
involved_in regulation of stomatal closure IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in chloroplast HDA PubMed 
located_in chloroplast ISM
Inferred from Sequence Model
more info
  
located_in chloroplast thylakoid HDA PubMed 
located_in cytosol HDA PubMed 
located_in nucleus HDA PubMed 

General protein information

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Preferred Names
Rhodanese/Cell cycle control phosphatase superfamily protein
NP_191537.4
  • Rhodanese/Cell cycle control phosphatase superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: nucleus, chloroplast; EXPRESSED IN: guard cell; CONTAINS InterPro DOMAIN/s: Rhodanese-like (InterPro:IPR001763); BEST Arabidopsis thaliana protein match is: calcium sensing receptor (TAIR:AT5G23060.1); Has 1153 Blast hits to 413 proteins in 144 species: Archae - 0; Bacteria - 338; Metazoa - 73; Fungi - 101; Plants - 75; Viruses - 6; Other Eukaryotes - 560 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003074.8 Reference assembly

    Range
    22086333..22090529
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_115840.5 → NP_191537.4  Rhodanese/Cell cycle control phosphatase superfamily protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_191537.4

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A5S9XP31, F4J9G2
    Conserved Domains (1) summary
    smart00450
    Location:411 → 525
    RHOD; Rhodanese Homology Domain
Nucleotide Protein
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