solute carrier family 35 protein (DUF914) [Arabidopsis thaliana (thale cress)] - Gene

Summary

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Official Full Name: solute carrier family 35 protein (DUF914)
Primary source: TAIR:AT3G59310
Locus tag: AT3G59310
See related: Araport:AT3G59310
Gene type: protein coding
RefSeq status: REVIEWED
Organism: Arabidopsis thaliana (ecotype: Columbia)
Lineage: Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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Genomic context

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See in Genome Data Viewer

Location:: chromosome: 3

Exon count:: 10

Sequence:: Chromosome: 3; NC_003074.8 (21921746..21924435, complement)

Chromosome 3 - NC_003074.8 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Go to reference sequence details

Genomic Sequence:: NC_003074.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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NM_001339960.1

Supported by ESTs:

NM_115793.5

Supported by ESTs:

NM_202729.1

Supported by ESTs:

Gene Ontology Provided by TAIR

Function	Evidence Code	Pubs
enables transmembrane transporter activity	IEA Inferred from Electronic Annotation more info

Process	Evidence Code	Pubs
involved_in transmembrane transport	IEA Inferred from Electronic Annotation more info

Component	Evidence Code	Pubs
is_active_in cellular_component	ND No biological Data available more info

General protein information

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Preferred Names: solute carrier family 35 protein (DUF914)

NP_191490.2

Eukaryotic protein of unknown function (DUF914); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF914, eukaryotic (InterPro:IPR009262); BEST Arabidopsis thaliana protein match is: Eukaryotic protein of unknown function (DUF914) (TAIR:AT3G59340.1); Has 755 Blast hits to 748 proteins in 196 species: Archae - 2; Bacteria - 101; Metazoa - 176; Fungi - 129; Plants - 126; Viruses - 0; Other Eukaryotes - 221 (source: NCBI BLink).

NP_974458.1

Eukaryotic protein of unknown function (DUF914); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF914, eukaryotic (InterPro:IPR009262); BEST Arabidopsis thaliana protein match is: Eukaryotic protein of unknown function (DUF914) (TAIR:AT3G59340.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

NC_003074.8 Reference assembly

Range

21921746..21924435 complement

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GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

NM_115793.5 → NP_191490.2 solute carrier family 35 protein (DUF914) [Arabidopsis thaliana]

See identical proteins and their annotated locations for NP_191490.2

Status: REVIEWED

UniProtKB/TrEMBL

A0A654FJ66, Q948Q9, Q9LX40

Conserved Domains (1) summary

pfam06027
Location:28 → 300

SLC35F; Solute carrier family 35
NM_202729.1 → NP_974458.1 solute carrier family 35 protein (DUF914) [Arabidopsis thaliana]

See identical proteins and their annotated locations for NP_974458.1

Status: REVIEWED

UniProtKB/TrEMBL

F4J890, Q9LX40

Conserved Domains (2) summary

pfam06027
Location:28 → 331

SLC35F; Solute carrier family 35

cl23754
Location:76 → 212

EamA; EamA-like transporter family
NM_001339960.1 → NP_001327244.1 solute carrier family 35 protein (DUF914) [Arabidopsis thaliana]

Status: REVIEWED

UniProtKB/TrEMBL

A0A1I9LRQ6, Q9LX40