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MICPUN_55565 predicted protein [ Micromonas commoda ]

Gene ID: 8250673, updated on 16-Nov-2023

Summary

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Gene symbol
MICPUN_55565
Gene description
predicted protein
Locus tag
MICPUN_55565
Gene type
protein coding
RNA name
predicted protein
RefSeq status
PROVISIONAL
Organism
Micromonas commoda (strain: RCC299)
Lineage
Eukaryota; Viridiplantae; Chlorophyta; prasinophytes; Mamiellophyceae; Mamiellales; Mamiellaceae; Micromonas
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Genomic context

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See MICPUN_55565 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
2
Sequence:
Chromosome: 1; NC_013038.1 (1931285..1936593)

Chromosome 1 - NC_013038.1Genomic Context describing neighboring genes Neighboring gene predicted protein Neighboring gene regulator of chromosome condensation, RCC1 Neighboring gene predicted protein Neighboring gene predicted protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_013038.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Green evolution and dynamic adaptations revealed by genomes of the marine picoeukaryotes Micromonas. Worden AZ, et al. Science, 2009 Apr 10. PMID 19359590
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables DNA-directed DNA polymerase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables hydrolase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in DNA-templated DNA replication IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in double-strand break repair IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Names
predicted protein

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_013038.1 Reference assembly

    Range
    1931285..1936593
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002507327.1 → XP_002507373.1  predicted protein [Micromonas commoda]

    See identical proteins and their annotated locations for XP_002507373.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    C1FET8
    Conserved Domains (3) summary
    pfam00271
    Location:1073 → 1204
    Helicase_C; Helicase conserved C-terminal domain
    cl02626
    Location:1556 → 1649
    DNA_pol_A; Family A polymerase primarily fills DNA gaps that arise during DNA repair, recombination and replication
    cl21455
    Location:505 → 731
    P-loop_NTPase; P-loop containing Nucleoside Triphosphate Hydrolases
Nucleotide Protein
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