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Ribosomal protein L1p/L10e family [ Arabidopsis thaliana (thale cress) ]

Gene ID: 825035, updated on 18-Sep-2024

Summary

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Official Full Name
Ribosomal protein L1p/L10e family
Primary source
TAIR:AT3G58660
Locus tag
AT3G58660
See related
Araport:AT3G58660
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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Genomic context

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Location:
chromosome: 3
Exon count:
1
Sequence:
Chromosome: 3; NC_003074.8 (21701520..21703114)

Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene Mitogen activated protein kinase kinase kinase-like protein Neighboring gene GPI-anchored adhesin-like protein Neighboring gene 2-aminoethanethiol dioxygenase, putative (DUF1637) Neighboring gene multiprotein bridging factor 1B

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003074.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

NM_115728.3

Gene Ontology Provided by TAIR

Component Evidence Code Pubs
NOT located_in cytosol RCA
inferred from Reviewed Computational Analysis
more info
 PubMed 
located_in nucleolus HDA PubMed 
located_in nucleus ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
Ribosomal protein L1p/L10e family
NP_191425.1
  • Ribosomal protein L1p/L10e family; FUNCTIONS IN: structural constituent of ribosome, RNA binding; INVOLVED IN: translation, RNA processing; LOCATED IN: nucleolus, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L1 (InterPro:IPR002143), Ribosomal protein L1, 2-layer alpha/beta-sandwich (InterPro:IPR016094); BEST Arabidopsis thaliana protein match is: Ribosomal protein L1p/L10e family (TAIR:AT2G42650.1); Has 3644 Blast hits to 2818 proteins in 411 species: Archae - 34; Bacteria - 198; Metazoa - 1370; Fungi - 494; Plants - 482; Viruses - 5; Other Eukaryotes - 1061 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003074.8 Reference assembly

    Range
    21701520..21703114
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_115728.3 → NP_191425.1  Ribosomal protein L1p/L10e family [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_191425.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178VLE7, A0A5S9XMQ5, Q9LXT5
    Conserved Domains (1) summary
    pfam00687
    Location:53 → 253
    Ribosomal_L1; Ribosomal protein L1p/L10e family
Nucleotide Protein
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