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GNAT acetyltransferase (DUF699) [ Arabidopsis thaliana (thale cress) ]

Gene ID: 824963, updated on 18-Sep-2024

Summary

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Official Full Name
GNAT acetyltransferase (DUF699)
Primary source
TAIR:AT3G57940
Locus tag
AT3G57940
See related
Araport:AT3G57940
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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Genomic context

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Location:
chromosome: 3
Exon count:
26
Sequence:
Chromosome: 3; NC_003074.8 (21449254..21456026)

Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene D111/G-patch domain-containing protein Neighboring gene squamosa promoter binding protein-like 15 Neighboring gene rho GTPase-activating gacO-like protein Neighboring gene cotton fiber protein Neighboring gene Emsy N Terminus (ENT) domain-containing protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003074.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. N4-acetylation of cytidine in mRNA plays essential roles in plants. Wang W, et al. Plant Cell, 2023 Sep 27. PMID 37367221, Free PMC Article
  2. Transcriptome-wide profiling of RNA N(4)-cytidine acetylation in Arabidopsis thaliana and Oryza sativa. Li B, et al. Mol Plant, 2023 Jun 5. PMID 37073130
  3. 14-3-3 proteins fine-tune plant nutrient metabolism. Shin R, et al. FEBS Lett, 2011 Jan 3. PMID 21094157
  4. A Pan-plant Protein Complex Map Reveals Deep Conservation and Novel Assemblies. McWhite CD, et al. Cell, 2020 Apr 16. PMID 32191846, Free PMC Article
  5. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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NM_001203192.1
NM_115656.4

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables RNA binding IDA
Inferred from Direct Assay
more info
 PubMed 
enables mRNA N-acetyltransferase activity IMP
Inferred from Mutant Phenotype
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
GNAT acetyltransferase (DUF699)
NP_001190121.1
  • FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Domain of unknown function DUF1726 (InterPro:IPR013562), Domain of unknown function DUF699, exodeoxyribonuclease V alpha chain (InterPro:IPR007807); BEST Arabidopsis thaliana protein match is: Domain of unknown function (DUF1726); Putative ATPase (DUF699) (TAIR:AT1G10490.1).
NP_191353.2
  • CONTAINS InterPro DOMAIN/s: Domain of unknown function DUF1726 (InterPro:IPR013562), Domain of unknown function DUF699, exodeoxyribonuclease V alpha chain (InterPro:IPR007807); BEST Arabidopsis thaliana protein match is: Domain of unknown function (DUF1726); Putative ATPase (DUF699) (TAIR:AT1G10490.1); Has 1409 Blast hits to 1357 proteins in 630 species: Archae - 151; Bacteria - 717; Metazoa - 171; Fungi - 150; Plants - 51; Viruses - 3; Other Eukaryotes - 166 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003074.8 Reference assembly

    Range
    21449254..21456026
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_115656.4 → NP_191353.2  GNAT acetyltransferase (DUF699) [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_191353.2

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q0WNS9, Q9M2Q4
    UniProtKB/TrEMBL
    A0A5S9XLT2
    Conserved Domains (1) summary
    COG1444
    Location:20 → 912
    TmcA; tRNA(Met) C34 N-acetyltransferase TmcA [Translation, ribosomal structure and biogenesis]

  2. NM_001203192.1 → NP_001190121.1  GNAT acetyltransferase (DUF699) [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_001190121.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A5S9XLT2, F4J4L4
    Conserved Domains (5) summary
    COG1444
    Location:20 → 907
    TmcA; tRNA(Met) C34 N-acetyltransferase TmcA [Translation, ribosomal structure and biogenesis]
    pfam05127
    Location:280 → 476
    Helicase_RecD; Helicase
    pfam08351
    Location:106 → 200
    DUF1726; Domain of unknown function (DUF1726)
    pfam13718
    Location:516 → 739
    GNAT_acetyltr_2; GNAT acetyltransferase 2
    pfam13725
    Location:766 → 881
    tRNA_bind_2; Possible tRNA binding domain
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9M2Q4.2

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