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Peptidase S41 family protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 824937, updated on 18-Sep-2024

Summary

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Official Full Name
Peptidase S41 family protein
Primary source
TAIR:AT3G57680
Locus tag
AT3G57680
See related
Araport:AT3G57680
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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Genomic context

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Location:
chromosome: 3
Exon count:
11
Sequence:
Chromosome: 3; NC_003074.8 (21380648..21383807)

Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene C2H2-type zinc finger family protein Neighboring gene ncRNA Neighboring gene Protein kinase superfamily protein Neighboring gene Protein kinase superfamily protein Neighboring gene arabinogalactan protein 23

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003074.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

GeneRIFs: Gene References Into Functions

General gene information

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NM_001339883.1
NM_115628.5

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables serine-type endopeptidase activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in proteolysis IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in extracellular region ISM
Inferred from Sequence Model
more info
  
located_in plasma membrane ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
Peptidase S41 family protein
NP_191327.4
  • Peptidase S41 family protein; FUNCTIONS IN: serine-type peptidase activity; INVOLVED IN: proteolysis, intracellular signaling pathway; LOCATED IN: chloroplast thylakoid lumen, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S41 (InterPro:IPR005151), PDZ/DHR/GLGF (InterPro:IPR001478), Peptidase S41A, C-terminal peptidase (InterPro:IPR004447); BEST Arabidopsis thaliana protein match is: Peptidase S41 family protein (TAIR:AT4G17740.2); Has 8999 Blast hits to 8993 proteins in 1973 species: Archae - 1; Bacteria - 5400; Metazoa - 54; Fungi - 0; Plants - 152; Viruses - 0; Other Eukaryotes - 3392 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003074.8 Reference assembly

    Range
    21380648..21383807
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001339882.1 → NP_001326999.1  Peptidase S41 family protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A1I9LQZ2
    Conserved Domains (1) summary
    COG0793
    Location:6 → 322
    CtpA; C-terminal processing protease CtpA/Prc, contains a PDZ domain [Posttranslational modification, protein turnover, chaperones]

  2. NM_115628.5 → NP_191327.4  Peptidase S41 family protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_191327.4

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    F4J3G5, Q9SVY2
    UniProtKB/TrEMBL
    A0A178VML9, A0A654FIR0
    Conserved Domains (1) summary
    PLN00049
    Location:114 → 470
    PLN00049; carboxyl-terminal processing protease; Provisional

  3. NM_001339883.1 → NP_001327000.1  Peptidase S41 family protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A1I9LQZ2
    Conserved Domains (1) summary
    COG0793
    Location:6 → 322
    CtpA; C-terminal processing protease CtpA/Prc, contains a PDZ domain [Posttranslational modification, protein turnover, chaperones]
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
F4J3G5.1

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