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ARR9 response regulator 9 [ Arabidopsis thaliana (thale cress) ]

Gene ID: 824871, updated on 18-Sep-2024

Summary

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Official Symbol
ARR9
Official Full Name
response regulator 9
Primary source
TAIR:AT3G57040
Locus tag
AT3G57040
See related
Araport:AT3G57040
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
ATRR4; F24I3_120; RESPONSE REGULATOR 4; response regulator 9
Summary
response regulator ARR9, A two-component response regulator-like protein with a receiver domain with a conserved aspartate residue and a possible phosphorylation site and at the N-terminal half. Appears to interact with histidine kinase like genes ATHP3 and ATHP2
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Genomic context

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See ARR9 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
6
Sequence:
Chromosome: 3; NC_003074.8 (21109059..21111567)

Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene Calcium-dependent phosphotriesterase superfamily protein Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene cystathionine beta-lyase Neighboring gene binding protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003074.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. the expression of ARR9 is uniquely regulated through the circadian clock in a cytokinin-independent manner
    Title: Expression of the cytokinin-induced type-A response regulator gene ARR9 is regulated by the circadian clock in Arabidopsis thaliana.
Submit: New GeneRIF Correction

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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NM_115563.3

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables phosphorelay response regulator activity ISS
Inferred from Sequence or Structural Similarity
more info
 PubMed 
enables protein binding IPI
Inferred from Physical Interaction
more info
 PubMed 
Process Evidence Code Pubs
acts_upstream_of_or_within circadian rhythm IMP
Inferred from Mutant Phenotype
more info
 PubMed 
acts_upstream_of_or_within cytokinin-activated signaling pathway IMP
Inferred from Mutant Phenotype
more info
 PubMed 
acts_upstream_of_or_within cytokinin-activated signaling pathway TAS
Traceable Author Statement
more info
 PubMed 
acts_upstream_of_or_within phosphorelay signal transduction system IPI
Inferred from Physical Interaction
more info
 PubMed 
acts_upstream_of_or_within phosphorelay signal transduction system ISS
Inferred from Sequence or Structural Similarity
more info
 PubMed 
acts_upstream_of_or_within regulation of DNA-templated transcription TAS
Traceable Author Statement
more info
 PubMed 
acts_upstream_of_or_within response to cytokinin IEP
Inferred from Expression Pattern
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm ISM
Inferred from Sequence Model
more info
  
located_in nucleus IDA
Inferred from Direct Assay
more info
 PubMed 

General protein information

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Preferred Names
response regulator 9
NP_191263.1
  • response regulator 9 (ARR9); CONTAINS InterPro DOMAIN/s: CheY-like (InterPro:IPR011006), Signal transduction response regulator, receiver domain (InterPro:IPR001789); BEST Arabidopsis thaliana protein match is: response regulator 3 (TAIR:AT2G41310.1); Has 31916 Blast hits to 31617 proteins in 2439 species: Archae - 203; Bacteria - 27463; Metazoa - 9; Fungi - 302; Plants - 1334; Viruses - 4; Other Eukaryotes - 2601 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003074.8 Reference assembly

    Range
    21109059..21111567
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001339837.1 → NP_001325622.1  response regulator 9 [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    O80366
    UniProtKB/TrEMBL
    A0A178VC70, A0A5S9XMA1

  2. NM_115563.3 → NP_191263.1  response regulator 9 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_191263.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    O80366
    UniProtKB/TrEMBL
    A0A178VC70, A0A5S9XMA1
    Conserved Domains (2) summary
    PLN03029
    Location:1 → 234
    PLN03029; type-a response regulator protein; Provisional
    cd00156
    Location:12 → 139
    REC; Signal receiver domain; originally thought to be unique to bacteria (CheY, OmpR, NtrC, and PhoB), now recently identified in eukaroytes ETR1 Arabidopsis thaliana; this domain receives the signal from the sensor partner in a two-component systems; ...
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
O80366.1

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