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PSBO photosystem II manganese-stabilizing polypeptide [ Micromonas commoda ]

Gene ID: 8248507, updated on 16-Nov-2023

Summary

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Gene symbol
PSBO
Gene description
photosystem II manganese-stabilizing polypeptide
Locus tag
MICPUN_92317
Gene type
protein coding
RNA name
photosystem II manganese-stabilizing polypeptide
RefSeq status
PROVISIONAL
Organism
Micromonas commoda (strain: RCC299)
Lineage
Eukaryota; Viridiplantae; Chlorophyta; prasinophytes; Mamiellophyceae; Mamiellales; Mamiellaceae; Micromonas
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Genomic context

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See PSBO in Genome Data Viewer
Location:
chromosome: 13
Exon count:
3
Sequence:
Chromosome: 13; NC_013050.1 (763121..764990, complement)

Chromosome 13 - NC_013050.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_013050.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Green evolution and dynamic adaptations revealed by genomes of the marine picoeukaryotes Micromonas. Worden AZ, et al. Science, 2009 Apr 10. PMID 19359590
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables oxygen evolving activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in photosystem II assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in photosystem II stabilization IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of photosystem II oxygen evolving complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Names
photosystem II manganese-stabilizing polypeptide
XP_002505809.1
  • 33 KDa photosystem II polypeptide from the oxygen evolving complex (OEC). TargeT and ChloroP predict 20aa cTP

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_013050.1 Reference assembly

    Range
    763121..764990 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002505763.1 → XP_002505809.1  photosystem II manganese-stabilizing polypeptide [Micromonas commoda]

    See identical proteins and their annotated locations for XP_002505809.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    C1EFD3
    Conserved Domains (1) summary
    PLN00037
    Location:1 → 301
    PLN00037; photosystem II oxygen-evolving enhancer protein 1; Provisional
Nucleotide Protein
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Gene LinkOut

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Molecular Biology Databases
Research Materials