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ankyrin repeat protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 824449, updated on 18-Sep-2024

Summary

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Official Full Name
ankyrin repeat protein
Primary source
TAIR:AT3G52830
Locus tag
AT3G52830
See related
Araport:AT3G52830
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
F8J2.1
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Genomic context

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Location:
chromosome: 3
Exon count:
1
Sequence:
Chromosome: 3; NC_003074.8 (19578005..19578265)

Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene purple acid phosphatase 21 Neighboring gene purple acid phosphatase 22 Neighboring gene beta-galactosidase 2 Neighboring gene vacuolar sorting receptor homolog 1 Neighboring gene mediator of RNA polymerase II transcription subunit-like protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003074.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

GeneRIFs: Gene References Into Functions

General gene information

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Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
Component Evidence Code Pubs
located_in mitochondrion ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
ankyrin repeat protein
NP_190851.1
  • FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: Ankyrin repeat family protein (TAIR:AT5G54700.1); Has 6 Blast hits to 6 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 5; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003074.8 Reference assembly

    Range
    19578005..19578265
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_115143.1 → NP_190851.1  ankyrin repeat protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_190851.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q9LXI2
Nucleotide Protein
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