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mucin-5AC-like protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 824317, updated on 18-Sep-2024

Summary

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Official Full Name
mucin-5AC-like protein
Primary source
TAIR:AT3G51540
Locus tag
AT3G51540
See related
Araport:AT3G51540
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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Genomic context

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Location:
chromosome: 3
Exon count:
5
Sequence:
Chromosome: 3; NC_003074.8 (19115184..19117461)

Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene diacylglycerol acyltransferase family Neighboring gene F-box/RNI-like/FBD-like domains-containing protein Neighboring gene Malectin/receptor-like protein kinase family protein Neighboring gene Disease resistance protein (TIR-NBS-LRR class) family

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003074.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Basic Proline-Rich Protein-Mediated Microtubules Are Essential for Lobe Growth and Flattened Cell Geometry. Wong JH, et al. Plant Physiol, 2019 Dec. PMID 31601644, Free PMC Article
  2. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

GeneRIFs: Gene References Into Functions

General gene information

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Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Component Evidence Code Pubs
located_in cortical microtubule IDA
Inferred from Direct Assay
more info
 PubMed 
located_in mitochondrion ISM
Inferred from Sequence Model
more info
  
located_in nucleus ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
mucin-5AC-like protein
NP_190722.1
  • unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G08670.1); Has 22744 Blast hits to 9965 proteins in 783 species: Archae - 64; Bacteria - 2760; Metazoa - 8515; Fungi - 3864; Plants - 499; Viruses - 702; Other Eukaryotes - 6340 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003074.8 Reference assembly

    Range
    19115184..19117461
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_115013.2 → NP_190722.1  mucin-5AC-like protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_190722.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178V8C8, A0A5S9XJV3, Q9SCZ5
    Conserved Domains (1) summary
    PHA03247
    Location:107 → 310
    PHA03247; large tegument protein UL36; Provisional

  2. NM_001339520.1 → NP_001326153.1  mucin-5AC-like protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178V8C8, A0A1I9LNE5, A0A5S9XJV3

  3. NM_001339521.1 → NP_001326152.1  mucin-5AC-like protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178V8C8, A0A1I9LNE4, A0A5S9XJV3

  4. NM_001339522.1 → NP_001326154.1  mucin-5AC-like protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A1I9LNE6
Nucleotide Protein
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