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HR2 homolog of RPW8 2 [ Arabidopsis thaliana (thale cress) ]

Gene ID: 824210, updated on 18-Sep-2024

Summary

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Official Symbol
HR2
Official Full Name
homolog of RPW8 2
Primary source
TAIR:AT3G50460
Locus tag
AT3G50460
See related
Araport:AT3G50460
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
homolog of RPW8 2
Summary
Homolog of RPW8
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Genomic context

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See HR2 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
2
Sequence:
Chromosome: 3; NC_003074.8 (18727666..18728810)

Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene golgin Neighboring gene methylesterase Neighboring gene homolog of RPW8 1 Neighboring gene homolog of RPW8 3 Neighboring gene homolog of RPW8 4

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003074.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Homologues of the RPW8 Resistance Protein Are Localized to the Extrahaustorial Membrane that Is Likely Synthesized De Novo. Berkey R, et al. Plant Physiol, 2017 Jan. PMID 27856916, Free PMC Article
  2. Origin and maintenance of a broad-spectrum disease resistance locus in Arabidopsis. Xiao S, et al. Mol Biol Evol, 2004 Sep. PMID 15155802
  3. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. HR2 is localized to the extrahaustorial membrane and plays a role in the powdery mildew resistance.
    Title: Homologues of the RPW8 Resistance Protein Are Localized to the Extrahaustorial Membrane that Is Likely Synthesized De Novo.
Submit: New GeneRIF Correction

General gene information

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Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in response to fungus IEP
Inferred from Expression Pattern
more info
 PubMed 
Component Evidence Code Pubs
located_in chloroplast ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
homolog of RPW8 2
NP_190615.1
  • homolog of RPW8 2 (HR2); CONTAINS InterPro DOMAIN/s: Powdery mildew resistance protein, RPW8 domain (InterPro:IPR008808); BEST Arabidopsis thaliana protein match is: homolog of RPW8 3 (TAIR:AT3G50470.1); Has 107 Blast hits to 107 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2; Plants - 104; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003074.8 Reference assembly

    Range
    18727666..18728810
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_114906.2 → NP_190615.1  homolog of RPW8 2 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_190615.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    A0A068LL46, Q9C5Z5, Q9SCS8
    UniProtKB/TrEMBL
    A0A514YDL0, A0A5S9XJQ6
    Conserved Domains (1) summary
    pfam05659
    Location:5 → 143
    RPW8; Arabidopsis broad-spectrum mildew resistance protein RPW8
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9SCS8.1

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