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uncharacterized protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 824166, updated on 18-Sep-2024

Summary

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Official Full Name
uncharacterized protein
Primary source
TAIR:AT3G50040
Locus tag
AT3G50040
See related
Araport:AT3G50040
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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Genomic context

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Location:
chromosome: 3
Exon count:
6
Sequence:
Chromosome: 3; NC_003074.8 (18549204..18551375, complement)

Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene Serine protease inhibitor, potato inhibitor I-type family protein Neighboring gene ARM-repeat/Tetratricopeptide repeat (TPR)-like protein Neighboring gene Eukaryotic aspartyl protease family protein Neighboring gene myb domain protein 77

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003074.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

GeneRIFs: Gene References Into Functions

General gene information

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NM_114864.4

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Component Evidence Code Pubs
located_in nucleus ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
uncharacterized protein
NP_190573.2
  • unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G37440.2); Has 70 Blast hits to 70 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 70; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003074.8 Reference assembly

    Range
    18549204..18551375 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001339452.1 → NP_001326235.1  uncharacterized protein AT3G50040 [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178VNL7, A0A5S9XJL6, Q147P4

  2. NM_001339451.1 → NP_001326236.1  uncharacterized protein AT3G50040 [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178VNL7, A0A1I9LNN2, A0A5S9XJL6

  3. NM_001339450.1 → NP_001326237.1  uncharacterized protein AT3G50040 [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178VNL7, A0A5S9XJL6, Q147P4

  4. NM_114864.4 → NP_190573.2  uncharacterized protein AT3G50040 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_190573.2

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178VNL7, A0A5S9XJL6, Q147P4
    Conserved Domains (1) summary
    cd11650
    Location:29 → 283
    AT4G37440_like; Uncharacterized protein domain conserved in plants
Nucleotide Protein
Heading Accession and Version

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