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GAMMA CAL2 gamma carbonic anhydrase-like 2 [ Arabidopsis thaliana (thale cress) ]

Gene ID: 824029, updated on 18-Sep-2024

Summary

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Official Symbol
GAMMA CAL2
Official Full Name
gamma carbonic anhydrase-like 2
Primary source
TAIR:AT3G48680
Locus tag
AT3G48680
See related
Araport:AT3G48680
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
AtCAL2; gamma carbonic anhydrase-like 2
Summary
Encodes a mitochondrial gamma carbonic anhydrase-like protein. Component of the NADH dehydrogenase complex.
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Genomic context

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See GAMMA CAL2 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
2
Sequence:
Chromosome: 3; NC_003074.8 (18034935..18037041)

Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene XH/XS domain-containing protein Neighboring gene egg cell-secreted-like protein (DUF1278) Neighboring gene alpha/beta-Hydrolases superfamily protein Neighboring gene carboxyesterase 13

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003074.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The γ-carbonic anhydrase subcomplex of mitochondrial complex I is essential for development and important for photomorphogenesis of Arabidopsis. Wang Q, et al. Plant Physiol, 2012 Nov. PMID 22991283, Free PMC Article
  2. The genetic and physiological analysis of late-flowering phenotype of T-DNA insertion mutants of AtCAL1 and AtCAL2 in Arabidopsis. Zhang J, et al. Mol Biol Rep, 2012 Feb. PMID 21695426
  3. Functional characterization of mutants affected in the carbonic anhydrase domain of the respiratory complex I in Arabidopsis thaliana. Soto D, et al. Plant J, 2015 Sep. PMID 26148112
  4. Gamma carbonic anhydrase like complex interact with plant mitochondrial complex I. Perales M, et al. Plant Mol Biol, 2004 Dec. PMID 15821992
  5. Carbonic anhydrase subunits form a matrix-exposed domain attached to the membrane arm of mitochondrial complex I in plants. Sunderhaus S, et al. J Biol Chem, 2006 Mar 10. PMID 16407270

See all (19) citations in PubMed

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. At3g48680 contributes to sustaining efficient photosynthesis under ambient (photorespiratory) conditions.
    Title: Functional characterization of mutants affected in the carbonic anhydrase domain of the respiratory complex I in Arabidopsis thaliana.
  2. A genetic study of the genes gammaCAL1 and gammaCAL2 that encode two subunits of the gammaCA subcomplex of mitochondrial complex I, is reported.
    Title: The γ-carbonic anhydrase subcomplex of mitochondrial complex I is essential for development and important for photomorphogenesis of Arabidopsis.
Submit: New GeneRIF Correction

Pathways from PubChem

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Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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NM_114727.4

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables protein binding IPI
Inferred from Physical Interaction
more info
 PubMed 
Process Evidence Code Pubs
acts_upstream_of_or_within photorespiration TAS
Traceable Author Statement
more info
 PubMed 
acts_upstream_of_or_within response to abscisic acid IGI
Inferred from Genetic Interaction
more info
 PubMed 
acts_upstream_of_or_within response to salt stress IGI
Inferred from Genetic Interaction
more info
 PubMed 
acts_upstream_of_or_within vegetative to reproductive phase transition of meristem IGI
Inferred from Genetic Interaction
more info
 PubMed 
Component Evidence Code Pubs
located_in chloroplast ISM
Inferred from Sequence Model
more info
  
located_in cytosol HDA PubMed 
located_in mitochondrial membrane IDA
Inferred from Direct Assay
more info
 PubMed 
located_in mitochondrion HDA PubMed 
located_in mitochondrion IDA
Inferred from Direct Assay
more info
 PubMed 
located_in plant-type vacuole HDA PubMed 
part_of respiratory chain complex I HDA PubMed 
part_of respiratory chain complex I IDA
Inferred from Direct Assay
more info
 PubMed 

General protein information

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Preferred Names
gamma carbonic anhydrase-like 2
NP_190437.1
  • gamma carbonic anhydrase-like 2 (GAMMA CAL2); FUNCTIONS IN: transferase activity; INVOLVED IN: photorespiration; LOCATED IN: in 6 components; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Trimeric LpxA-like (InterPro:IPR011004); BEST Arabidopsis thaliana protein match is: gamma carbonic anhydrase like 1 (TAIR:AT5G63510.1); Has 6263 Blast hits to 6236 proteins in 1756 species: Archae - 151; Bacteria - 4130; Metazoa - 15; Fungi - 10; Plants - 165; Viruses - 0; Other Eukaryotes - 1792 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003074.8 Reference assembly

    Range
    18034935..18037041
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_114727.4 → NP_190437.1  gamma carbonic anhydrase-like 2 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_190437.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q9SMN1
    UniProtKB/TrEMBL
    A0A178VI68, A0A5S9XJ47
    Conserved Domains (2) summary
    cd04645
    Location:71 → 228
    LbH_gamma_CA_like; Gamma carbonic anhydrase-like: This family is composed of gamma carbonic anhydrase (CA), Ferripyochelin Binding Protein (FBP), E. coli paaY protein, and similar proteins. CAs are zinc-containing enzymes that catalyze the reversible hydration of carbon ...
    PLN02472
    Location:2 → 256
    PLN02472; uncharacterized protein
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9SMN1.1

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