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secE/sec61-gamma protein transport protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 824017, updated on 18-Sep-2024

Summary

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Official Full Name
secE/sec61-gamma protein transport protein
Primary source
TAIR:AT3G48570
Locus tag
AT3G48570
See related
Araport:AT3G48570
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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Genomic context

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Location:
chromosome: 3
Exon count:
3
Sequence:
Chromosome: 3; NC_003074.8 (18003818..18005272, complement)

Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene SHOOT GRAVITROPISM-like protein Neighboring gene chlorsulfuron/imidazolinone resistant 1 Neighboring gene miscRNA Neighboring gene xyloglucan endotransglucosylase/hydrolase 11

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003074.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A high content in lipid-modified peripheral proteins and integral receptor kinases features in the arabidopsis plasma membrane proteome. Marmagne A, et al. Mol Cell Proteomics, 2007 Nov. PMID 17644812
  2. Border control--a membrane-linked interactome of Arabidopsis. Jones AM, et al. Science, 2014 May 16. PMID 24833385
  3. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

NM_114716.4

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables protein transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in intracellular protein transport IEA
Inferred from Electronic Annotation
more info
  
involved_in protein targeting IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in plasma membrane HDA PubMed 

General protein information

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Preferred Names
secE/sec61-gamma protein transport protein
NP_566909.1
  • secE/sec61-gamma protein transport protein; FUNCTIONS IN: P-P-bond-hydrolysis-driven protein transmembrane transporter activity; INVOLVED IN: intracellular protein transport, protein targeting, protein transport; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein translocase SEC61 complex gamma subunit (InterPro:IPR008158), Protein secE/sec61-gamma protein (InterPro:IPR001901); BEST Arabidopsis thaliana protein match is: secE/sec61-gamma protein transport protein (TAIR:AT5G50460.1); Has 573 Blast hits to 573 proteins in 208 species: Archae - 0; Bacteria - 0; Metazoa - 240; Fungi - 132; Plants - 109; Viruses - 0; Other Eukaryotes - 92 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003074.8 Reference assembly

    Range
    18003818..18005272 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_114716.4 → NP_566909.1  secE/sec61-gamma protein transport protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_566909.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q9SMP2
    UniProtKB/TrEMBL
    A0A178VBI0, A0A384L6E4, Q2HIR4
    Conserved Domains (1) summary
    cl00481
    Location:11 → 68
    SecE; SecE/Sec61-gamma subunits of protein translocation complex
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9SMP2.1

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