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Cysteine/Histidine-rich C1 domain family protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 823998, updated on 18-Sep-2024

Summary

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Official Full Name
Cysteine/Histidine-rich C1 domain family protein
Primary source
TAIR:AT3G48400
Locus tag
AT3G48400
See related
Araport:AT3G48400
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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Genomic context

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Location:
chromosome: 3
Exon count:
2
Sequence:
Chromosome: 3; NC_003074.8 (17923678..17925589)

Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene Peptidase C78, ubiquitin fold modifier-specific peptidase 1/ 2 Neighboring gene MA3 domain-containing protein Neighboring gene alpha/beta-Hydrolases superfamily protein Neighboring gene Haloacid dehalogenase-like hydrolase (HAD) superfamily protein Neighboring gene DNAse I-like superfamily protein Neighboring gene relative of early flowering 6

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003074.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

GeneRIFs: Gene References Into Functions

General gene information

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Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
  

General protein information

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Preferred Names
Cysteine/Histidine-rich C1 domain family protein
NP_680115.1
  • Cysteine/Histidine-rich C1 domain family protein; CONTAINS InterPro DOMAIN/s: DC1 (InterPro:IPR004146), C1-like (InterPro:IPR011424); BEST Arabidopsis thaliana protein match is: Cysteine/Histidine-rich C1 domain family protein (TAIR:AT5G22355.1); Has 1943 Blast hits to 657 proteins in 28 species: Archae - 0; Bacteria - 0; Metazoa - 18; Fungi - 0; Plants - 1919; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003074.8 Reference assembly

    Range
    17923678..17925589
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_148862.1 → NP_680115.1  Cysteine/Histidine-rich C1 domain family protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_680115.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    F4JDY6, Q9STM0
    Conserved Domains (2) summary
    pfam03107
    Location:307 → 337
    C1_2; C1 domain
    pfam07649
    Location:396 → 424
    C1_3; C1-like domain
Nucleotide Protein
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