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ABCA4 ATP binding cassette subfamily A4 [ Arabidopsis thaliana (thale cress) ]

Gene ID: 823929, updated on 18-Sep-2024

Summary

Official Symbol
ABCA4
Official Full Name
ATP binding cassette subfamily A4
Primary source
TAIR:AT3G47750
Locus tag
AT3G47750
See related
Araport:AT3G47750
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
ATATH3; ATP binding cassette subfamily A4; ATP-binding cassette A4
Summary
member of ATH subfamily
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Genomic context

See ABCA4 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
16
Sequence:
Chromosome: 3; NC_003074.8 (17606359..17611065)

Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene ATP-binding cassette A2 Neighboring gene ncRNA Neighboring gene ABC2 homolog 2 Neighboring gene ABC2 homolog 4 Neighboring gene ABC2 homolog 5

General gene information

NM_001339331.1

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables ABC-type transporter activity IEA
Inferred from Electronic Annotation
more info
 
enables ATP hydrolysis activity IEA
Inferred from Electronic Annotation
more info
 
enables ATPase-coupled transmembrane transporter activity ISS
Inferred from Sequence or Structural Similarity
more info
 
enables transmembrane transporter activity ISS
Inferred from Sequence or Structural Similarity
more info
PubMed 
Process Evidence Code Pubs
involved_in transmembrane transport IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
located_in plasma membrane ISM
Inferred from Sequence Model
more info
 

General protein information

Preferred Names
ATP binding cassette subfamily A4
NP_001319703.1
  • ATP binding cassette subfamily A4 (ABCA4); FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances, transporter activity; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: ABC2 homolog 4 (TAIR:AT3G47760.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003074.8 Reference assembly

    Range
    17606359..17611065
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001339331.1NP_001319703.1  ATP binding cassette subfamily A4 [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    F4JCP3, Q9STT8
    UniProtKB/TrEMBL
    A0A7G2EP81