U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

hypothetical protein (DUF247) [ Arabidopsis thaliana (thale cress) ]

Gene ID: 823874, updated on 18-Sep-2024

Summary

Go to the top of the page Help
Official Full Name
hypothetical protein (DUF247)
Primary source
TAIR:AT3G47210
Locus tag
AT3G47210
See related
Araport:AT3G47210
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: 3
Exon count:
2
Sequence:
Chromosome: 3; NC_003074.8 (17385161..17387244)

Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene transmembrane protein, putative (DUF247) Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene phosphatidylinositol-speciwc phospholipase C9 Neighboring gene pseudo

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_003074.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Mapping the signaling network of BIN2 kinase using TurboID-mediated biotin labeling and phosphoproteomics. Kim TW, et al. Plant Cell, 2023 Mar 15. PMID 36660928, Free PMC Article
  2. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

GeneRIFs: Gene References Into Functions

Interactions

Go to the top of the page Help
Products Interactant Other Gene Complex Source Pubs Description

General gene information

Go to the top of the page Help
NM_114588.3

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Component Evidence Code Pubs
located_in nucleus ISM
Inferred from Sequence Model
more info
  

General protein information

Go to the top of the page Help
Preferred Names
hypothetical protein (DUF247)
NP_190305.1
  • Plant protein of unknown function (DUF247); INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: inflorescence meristem, petal, hypocotyl, root; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF247, plant (InterPro:IPR004158); BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF247) (TAIR:AT3G47250.3); Has 1302 Blast hits to 1037 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 1301; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003074.8 Reference assembly

    Range
    17385161..17387244
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_114588.3 → NP_190305.1  hypothetical protein (DUF247) [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_190305.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178VHX8, Q9SD52
    Conserved Domains (1) summary
    pfam03140
    Location:95 → 450
    DUF247; Plant protein of unknown function
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials
Tools