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RABA2c RAB GTPase homolog A2C [ Arabidopsis thaliana (thale cress) ]

Gene ID: 823836, updated on 18-Sep-2024

Summary

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Official Symbol
RABA2c
Official Full Name
RAB GTPase homolog A2C
Primary source
TAIR:AT3G46830
Locus tag
AT3G46830
See related
Araport:AT3G46830
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
ARABIDOPSIS RAB GTPASE HOMOLOG A2C; ATRAB-A2C; ATRAB11A; ATRABA2C; RAB GTPase homolog A2C; RAB GTPASE HOMOLOG A2C; RAB-A2C
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Genomic context

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See RABA2c in Genome Data Viewer
Location:
chromosome: 3
Exon count:
3
Sequence:
Chromosome: 3; NC_003074.8 (17246228..17248823, complement)

Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene Cysteine/Histidine-rich C1 domain family protein Neighboring gene type one serine/threonine protein phosphatase 5 Neighboring gene ncRNA Neighboring gene Subtilase family protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003074.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Rab-A2 and Rab-A3 GTPases define a trans-golgi endosomal membrane domain in Arabidopsis that contributes substantially to the cell plate. Chow CM, et al. Plant Cell, 2008 Jan. PMID 18239134, Free PMC Article
  2. CHARACTERIZATION OF A RABE (RAS GENE FROM RAT BRAIN E) GTPASE EXPRESSED DURING MORPHOGENESIS IN THE UNICELLULAR GREEN ALGA MICRASTERIAS DENTICULATA (ZYGNEMATOPHYCEAE, STREPTOPHYTA)(1). Vannerum K, et al. J Phycol, 2012 Jun. PMID 27011085
  3. Tip Growth Defective1 interacts with the cellulose synthase complex to regulate cellulose synthesis in Arabidopsis thaliana. Lampugnani ER, et al. PLoS One, 2024. PMID 38358988, Free PMC Article
  4. Arabidopsis plasmodesmal proteome. Fernandez-Calvino L, et al. PLoS One, 2011 Apr 20. PMID 21533090, Free PMC Article
  5. Border control--a membrane-linked interactome of Arabidopsis. Jones AM, et al. Science, 2014 May 16. PMID 24833385

See all (7) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

NM_001339276.1
NM_114550.4

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables GTPase activity IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in cell plate IDA
Inferred from Direct Assay
more info
 PubMed 
located_in cytosol HDA PubMed 
located_in endosome IDA
Inferred from Direct Assay
more info
 PubMed 
located_in plasmodesma HDA PubMed 

General protein information

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Preferred Names
RAB GTPase homolog A2C
NP_190267.1
  • RAB GTPase homolog A2C (RABA2c); FUNCTIONS IN: GTP binding; INVOLVED IN: protein transport, small GTPase mediated signal transduction; LOCATED IN: endosome, plasma membrane, cell plate; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ras GTPase (InterPro:IPR001806), Small GTP-binding protein (InterPro:IPR005225), Small GTPase (InterPro:IPR020851), Ras (InterPro:IPR013753), Ras small GTPase, Rab type (InterPro:IPR003579), Rab11-related (InterPro:IPR015595); BEST Arabidopsis thaliana protein match is: RAB GTPase homolog A2D (TAIR:AT5G59150.1); Has 28770 Blast hits to 28717 proteins in 774 species: Archae - 26; Bacteria - 141; Metazoa - 14934; Fungi - 4337; Plants - 3364; Viruses - 20; Other Eukaryotes - 5948 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003074.8 Reference assembly

    Range
    17246228..17248823 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_114550.4 → NP_190267.1  RAB GTPase homolog A2C [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_190267.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q96283
    UniProtKB/TrEMBL
    A0A178V892, A0A5S9XIL3
    Conserved Domains (1) summary
    PLN03110
    Location:1 → 217
    PLN03110; Rab GTPase; Provisional

  2. NM_001339276.1 → NP_001327707.1  RAB GTPase homolog A2C [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q96283
    UniProtKB/TrEMBL
    A0A178V892, A0A5S9XIL3
    Conserved Domains (1) summary
    PLN03110
    Location:1 → 217
    PLN03110; Rab GTPase; Provisional
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q96283.4

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