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ER protein carbohydrate-binding protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 823769, updated on 18-Sep-2024

Summary

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Official Full Name
ER protein carbohydrate-binding protein
Primary source
TAIR:AT3G46240
Locus tag
AT3G46240
See related
Araport:AT3G46240
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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Genomic context

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Location:
chromosome: 3
Exon count:
5
Sequence:
Chromosome: 3; NC_003074.8 (16985843..16988064, complement)

Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene E3 UFM1-protein ligase-like protein Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene heat shock protein 17.4 Neighboring gene miscRNA Neighboring gene kinase-like protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003074.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

GeneRIFs: Gene References Into Functions

General gene information

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Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
  

General protein information

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Preferred Names
ER protein carbohydrate-binding protein
NP_190210.2
  • BEST Arabidopsis thaliana protein match is: receptor protein kinase-related (TAIR:AT3G46270.1); Has 38685 Blast hits to 11525 proteins in 945 species: Archae - 63; Bacteria - 11586; Metazoa - 8974; Fungi - 2953; Plants - 5350; Viruses - 724; Other Eukaryotes - 9035 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003074.8 Reference assembly

    Range
    16985843..16988064 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_114493.2 → NP_190210.2  ER protein carbohydrate-binding protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_190210.2

    Status: REVIEWED

    UniProtKB/TrEMBL
    F4J800, Q9LX71
    Conserved Domains (1) summary
    pfam12819
    Location:8 → 296
    Malectin_like; Carbohydrate-binding protein of the ER
Nucleotide Protein
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