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uncharacterized protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 823640, updated on 18-Sep-2024

Summary

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Official Full Name
uncharacterized protein
Primary source
TAIR:AT3G45050
Locus tag
AT3G45050
See related
Araport:AT3G45050
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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Genomic context

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Location:
chromosome: 3
Exon count:
4
Sequence:
Chromosome: 3; NC_003074.8 (16475957..16477524)

Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene Ribosomal protein S10p/S20e family protein Neighboring gene phosphatidate cytidylyltransferase family protein Neighboring gene high affinity nitrate transporter 2.6 Neighboring gene P-loop containing nucleoside triphosphate hydrolases superfamily protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003074.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

GeneRIFs: Gene References Into Functions

General gene information

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Homology

NM_114374.4
NM_180325.2
NM_180326.3
NM_202657.3

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Component Evidence Code Pubs
located_in chloroplast ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
uncharacterized protein
NP_190091.2
  • unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 28 Blast hits to 28 proteins in 12 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 26; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
NP_850656.1
  • unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 26 Blast hits to 26 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 26; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
NP_850657.1
  • unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 28 Blast hits to 28 proteins in 12 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 26; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
NP_974386.1
  • unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003074.8 Reference assembly

    Range
    16475957..16477524
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_180326.3 → NP_850657.1  uncharacterized protein AT3G45050 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_850657.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178VHN5, A0A384KM14, B9DG54, Q9LXH1
    Conserved Domains (1) summary
    COG1107
    Location:83 → 155
    COG1107; Archaea-specific RecJ-like exonuclease, contains DnaJ-type Zn finger domain [Replication, recombination and repair]

  2. NM_202657.3 → NP_974386.1  uncharacterized protein AT3G45050 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_974386.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178VHN5, A0A384KM14, B9DG54, Q9LXH1
    Conserved Domains (1) summary
    COG1107
    Location:83 → 155
    COG1107; Archaea-specific RecJ-like exonuclease, contains DnaJ-type Zn finger domain [Replication, recombination and repair]

  3. NM_114374.4 → NP_190091.2  uncharacterized protein AT3G45050 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_190091.2

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178VHN5, A0A384KM14, B9DG54, Q9LXH1
    Conserved Domains (1) summary
    COG1107
    Location:83 → 155
    COG1107; Archaea-specific RecJ-like exonuclease, contains DnaJ-type Zn finger domain [Replication, recombination and repair]

  4. NM_180325.2 → NP_850656.1  uncharacterized protein AT3G45050 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_850656.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q8GWW5
Nucleotide Protein
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