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CHX12 cation/H+ exchanger 12 [ Arabidopsis thaliana (thale cress) ]

Gene ID: 823625, updated on 18-Sep-2024

Summary

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Official Symbol
CHX12
Official Full Name
cation/H+ exchanger 12
Primary source
TAIR:AT3G44910
Locus tag
AT3G44910
See related
Araport:AT3G44910
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
ATCHX12; cation/H+ exchanger 12
Summary
member of Putative Na+/H+ antiporter family
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Genomic context

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See CHX12 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
3
Sequence:
Chromosome: 3; NC_003074.8 (16392064..16394579, complement)

Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene ribosomal protein L9 Neighboring gene cation/H+ exchanger 4 Neighboring gene cation/H+ exchanger 11 Neighboring gene miscRNA

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003074.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

GeneRIFs: Gene References Into Functions

General gene information

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Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables sodium:proton antiporter activity ISS
Inferred from Sequence or Structural Similarity
more info
  
Process Evidence Code Pubs
involved_in proton transmembrane transport IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
cation/H+ exchanger 12
NP_190077.2
  • cation/H+ exchanger 12 (CHX12); FUNCTIONS IN: monovalent cation:hydrogen antiporter activity, sodium:hydrogen antiporter activity; INVOLVED IN: cation transport; LOCATED IN: integral to membrane; EXPRESSED IN: male gametophyte, pollen tube; CONTAINS InterPro DOMAIN/s: Cation/H+ exchanger (InterPro:IPR006153); BEST Arabidopsis thaliana protein match is: cation/H+ exchanger 10 (TAIR:AT3G44930.1); Has 1561 Blast hits to 1533 proteins in 481 species: Archae - 61; Bacteria - 809; Metazoa - 0; Fungi - 120; Plants - 525; Viruses - 0; Other Eukaryotes - 46 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003074.8 Reference assembly

    Range
    16392064..16394579 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_114360.2 → NP_190077.2  cation/H+ exchanger 12 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_190077.2

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q9FYC0
    UniProtKB/TrEMBL
    A0A5S9XIE4, A0A654FEQ8
    Conserved Domains (2) summary
    PLN03159
    Location:17 → 754
    PLN03159; cation/H(+) antiporter 15; Provisional
    cl01133
    Location:61 → 442
    Na_H_Exchanger; Sodium/hydrogen exchanger family
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9FYC0.2

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