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Membrane insertion protein, OxaA/YidC with tetratricopeptide repeat domain-containing protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 823562, updated on 18-Sep-2024

Summary

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Official Full Name
Membrane insertion protein, OxaA/YidC with tetratricopeptide repeat domain-containing protein
Primary source
TAIR:AT3G44370
Locus tag
AT3G44370
See related
Araport:AT3G44370
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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Genomic context

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Location:
chromosome: 3
Exon count:
14
Sequence:
Chromosome: 3; NC_003074.8 (16030270..16035273, complement)

Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene NAC domain containing protein 61 Neighboring gene ncRNA Neighboring gene Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family Neighboring gene ncRNA

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003074.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. OXA2b is Crucial for Proper Membrane Insertion of COX2 during Biogenesis of Complex IV in Plant Mitochondria. Kolli R, et al. Plant Physiol, 2019 Feb. PMID 30487140, Free PMC Article
  2. The hydrophobic proteome of mitochondrial membranes from Arabidopsis cell suspensions. Brugière S, et al. Phytochemistry, 2004 Jun. PMID 15276431
  3. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

GeneRIFs: Gene References Into Functions

General gene information

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NM_001339132.1
NM_114305.4

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables membrane insertase activity IEA
Inferred from Electronic Annotation
more info
  
enables protein binding IPI
Inferred from Physical Interaction
more info
 PubMed 
Process Evidence Code Pubs
acts_upstream_of_or_within mitochondrial cytochrome c oxidase assembly IMP
Inferred from Mutant Phenotype
more info
 PubMed 
acts_upstream_of_or_within protein insertion into membrane IMP
Inferred from Mutant Phenotype
more info
 PubMed 
Component Evidence Code Pubs
located_in chloroplast ISM
Inferred from Sequence Model
more info
  
located_in mitochondrion HDA PubMed 

General protein information

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Preferred Names
Membrane insertion protein, OxaA/YidC with tetratricopeptide repeat domain-containing protein
NP_190023.2
  • Membrane insertion protein, OxaA/YidC with tetratricopeptide repeat domain; FUNCTIONS IN: binding; INVOLVED IN: protein insertion into membrane; LOCATED IN: mitochondrion; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide-like helical (InterPro:IPR011990), Membrane insertion protein, OxaA/YidC (InterPro:IPR001708), Tetratricopeptide repeat-containing (InterPro:IPR013026); BEST Arabidopsis thaliana protein match is: Membrane insertion protein, OxaA/YidC with tetratricopeptide repeat domain (TAIR:AT1G65080.1); Has 1410 Blast hits to 1410 proteins in 539 species: Archae - 10; Bacteria - 840; Metazoa - 166; Fungi - 108; Plants - 98; Viruses - 0; Other Eukaryotes - 188 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003074.8 Reference assembly

    Range
    16030270..16035273 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_114305.4 → NP_190023.2  Membrane insertion protein, OxaA/YidC with tetratricopeptide repeat domain-containing protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_190023.2

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q0WUC5, Q7XJ56, Q9M288, Q9M289
    UniProtKB/TrEMBL
    A0A654FCM1
    Conserved Domains (3) summary
    sd00006
    Location:386 → 414
    TPR; TPR repeat [structural motif]
    pfam13414
    Location:386 → 446
    TPR_11; TPR repeat
    cl00489
    Location:77 → 356
    60KD_IMP; 60Kd inner membrane protein

  2. NM_001339132.1 → NP_001325751.1  Membrane insertion protein, OxaA/YidC with tetratricopeptide repeat domain-containing protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A1I9LM69
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q0WUC5.1

Gene LinkOut

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