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CYP71B38 cytochrome P450, family 71, subfamily B, polypeptide 38 [ Arabidopsis thaliana (thale cress) ]

Gene ID: 823550, updated on 18-Sep-2024

Summary

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Official Symbol
CYP71B38
Official Full Name
cytochrome P450, family 71, subfamily B, polypeptide 38
Primary source
TAIR:AT3G44250
Locus tag
AT3G44250
See related
Araport:AT3G44250
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
''cytochrome P450; cytochrome P450; family 71; polypeptide 38; polypeptide 38''; subfamily B
Summary
putative cytochrome P450
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Genomic context

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See CYP71B38 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
3
Sequence:
Chromosome: 3; NC_003074.8 (15948505..15950245, complement)

Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene Polynucleotidyl transferase, ribonuclease H-like superfamily protein Neighboring gene miscRNA Neighboring gene Polynucleotidyl transferase, ribonuclease H-like superfamily protein Neighboring gene Pol polyprotein/retrotransposon

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003074.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

GeneRIFs: Gene References Into Functions

Pathways from PubChem

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General gene information

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Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables heme binding IEA
Inferred from Electronic Annotation
more info
  
enables iron ion binding IEA
Inferred from Electronic Annotation
more info
  
enables oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
Component Evidence Code Pubs
located_in chloroplast ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
cytochrome P450, family 71, subfamily B, polypeptide 38
NP_190011.1
  • ''cytochrome P450, family 71, subfamily B, polypeptide 38'' (CYP71B38); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: sepal, male gametophyte, carpel; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome p450 71b5 (TAIR:AT3G53280.1); Has 32929 Blast hits to 32671 proteins in 1674 species: Archae - 48; Bacteria - 3051; Metazoa - 12123; Fungi - 6922; Plants - 9690; Viruses - 3; Other Eukaryotes - 1092 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003074.8 Reference assembly

    Range
    15948505..15950245 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_114293.2 → NP_190011.1  cytochrome P450, family 71, subfamily B, polypeptide 38 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_190011.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    F4J1W9, Q1PEI9, Q9LXM3
    UniProtKB/TrEMBL
    A0A654FDK3
    Conserved Domains (1) summary
    cl12078
    Location:27 → 497
    p450; Cytochrome P450
Nucleotide Protein
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