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SUS4 sucrose synthase 4 [ Arabidopsis thaliana (thale cress) ]

Gene ID: 823393, updated on 18-Sep-2024

Summary

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Official Symbol
SUS4
Official Full Name
sucrose synthase 4
Primary source
TAIR:AT3G43190
Locus tag
AT3G43190
See related
Araport:AT3G43190
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
ARABIDOPSIS THALIANA SUCROSE SYNTHASE 4; ATSUS4; sucrose synthase 4
Summary
Encodes a protein with sucrose synthase activity (SUS4).
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Genomic context

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See SUS4 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
13
Sequence:
Chromosome: 3; NC_003074.8 (15179010..15184105, complement)

Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene pseudo Neighboring gene RING/U-box superfamily protein Neighboring gene miscRNA Neighboring gene pseudo

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003074.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A reassessment of the role of sucrose synthase in the hypoxic sucrose-ethanol transition in Arabidopsis. Santaniello A, et al. Plant Cell Environ, 2014 Oct. PMID 24810896
  2. Reciprocal modulation of responses to nitrate starvation and hypoxia in roots and leaves of Arabidopsis thaliana. Safavi-Rizi V, et al. Plant Signal Behav, 2024 Dec 31. PMID 38165809, Free PMC Article
  3. Structure and expression profile of the sucrose synthase multigene family in Arabidopsis. Baud S, et al. J Exp Bot, 2004 Feb. PMID 14739263
  4. Analysis of the sucrose synthase gene family in Arabidopsis. Bieniawska Z, et al. Plant J, 2007 Mar. PMID 17257168
  5. Large-scale characterization of integral proteins from Arabidopsis vacuolar membrane by two-dimensional liquid chromatography. Szponarski W, et al. Proteomics, 2004 Feb. PMID 14760709

See all (9) citations in PubMed

GeneRIFs: Gene References Into Functions

Pathways from PubChem

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Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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NM_001339091.1
NM_114187.5

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables glycosyltransferase activity ISS
Inferred from Sequence or Structural Similarity
more info
  
enables sucrose synthase activity IDA
Inferred from Direct Assay
more info
 PubMed 
enables sucrose synthase activity IGI
Inferred from Genetic Interaction
more info
 PubMed 
Process Evidence Code Pubs
acts_upstream_of_or_within cellular response to hypoxia HEP PubMed 
involved_in response to hypoxia IEP
Inferred from Expression Pattern
more info
 PubMed 
involved_in response to nitrate starvation IEP
Inferred from Expression Pattern
more info
 PubMed 
involved_in sucrose metabolic process IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in vacuole HDA PubMed 

General protein information

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Preferred Names
sucrose synthase 4
NP_566865.2
  • sucrose synthase 4 (SUS4); FUNCTIONS IN: UDP-glycosyltransferase activity, sucrose synthase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: sucrose biosynthetic process, response to hypoxia; LOCATED IN: plasma membrane, vacuole, membrane; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Sucrose synthase, plant/cyanobacteria (InterPro:IPR012820), Sucrose synthase (InterPro:IPR000368), Glycosyl transferase, group 1 (InterPro:IPR001296); BEST Arabidopsis thaliana protein match is: sucrose synthase 1 (TAIR:AT5G20830.2); Has 7692 Blast hits to 7689 proteins in 1582 species: Archae - 293; Bacteria - 4740; Metazoa - 106; Fungi - 81; Plants - 801; Viruses - 0; Other Eukaryotes - 1671 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003074.8 Reference assembly

    Range
    15179010..15184105 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_114187.5 → NP_566865.2  sucrose synthase 4 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_566865.2

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q0WT99, Q94CC8, Q9LXL5
    UniProtKB/TrEMBL
    A0A7G2EPY8
    Conserved Domains (3) summary
    PLN00142
    Location:2 → 808
    PLN00142; sucrose synthase
    pfam00534
    Location:567 → 727
    Glycos_transf_1; Glycosyl transferases group 1
    pfam00862
    Location:18 → 555
    Sucrose_synth; Sucrose synthase

  2. NM_001339091.1 → NP_001326640.1  sucrose synthase 4 [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q0WT99, Q94CC8, Q9LXL5
    UniProtKB/TrEMBL
    A0A7G2EPY8
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9LXL5.1

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