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uncharacterized protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 823187, updated on 18-Sep-2024

Summary

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Official Full Name
uncharacterized protein
Primary source
TAIR:AT3G42150
Locus tag
AT3G42150
See related
Araport:AT3G42150
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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Genomic context

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Location:
chromosome: 3
Exon count:
3
Sequence:
Chromosome: 3; NC_003074.8 (14309275..14311638)

Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene zinc ion binding / nucleic acid binding protein Neighboring gene uncharacterized protein Neighboring gene glycosyl hydrolase 9B9 protein Neighboring gene glycosyl hydrolase family 9 protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003074.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

GeneRIFs: Gene References Into Functions

General gene information

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Homology

NM_001035721.2
NM_114082.3
NM_202648.3

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
  

General protein information

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Preferred Names
uncharacterized protein
NP_001030798.1
  • unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G21930.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
NP_566862.1
  • unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G21930.1); Has 42 Blast hits to 42 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 42; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
NP_974377.1
  • unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G21930.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003074.8 Reference assembly

    Range
    14309275..14311638
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_114082.3 → NP_566862.1  uncharacterized protein AT3G42150 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_566862.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178VCF1, A0A384LCP0, A0A654FC67, Q9M2N7
    Conserved Domains (1) summary
    pfam03458
    Location:15 → 60
    UPF0126; UPF0126 domain

  2. NM_001035721.2 → NP_001030798.1  uncharacterized protein AT3G42150 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_001030798.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178VCF1, A0A384LCP0, A0A654FC67, Q9M2N7
    Conserved Domains (1) summary
    pfam03458
    Location:15 → 60
    UPF0126; UPF0126 domain

  3. NM_202648.3 → NP_974377.1  uncharacterized protein AT3G42150 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_974377.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178VCF1, A0A384LCP0, A0A654FC67, Q9M2N7
    Conserved Domains (1) summary
    pfam03458
    Location:15 → 60
    UPF0126; UPF0126 domain
Nucleotide Protein
Heading Accession and Version

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