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kxDL motif protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 822561, updated on 18-Sep-2024

Summary

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Official Full Name
kxDL motif protein
Primary source
TAIR:AT3G29130
Locus tag
AT3G29130
See related
Araport:AT3G29130
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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Genomic context

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Location:
chromosome: 3
Exon count:
5
Sequence:
Chromosome: 3; NC_003074.8 (11099603..11104073, complement)

Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene pseudo Neighboring gene miscRNA Neighboring gene uncharacterized protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003074.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

GeneRIFs: Gene References Into Functions

General gene information

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NM_113836.2

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Component Evidence Code Pubs
located_in mitochondrion ISM
Inferred from Sequence Model
more info
  
located_in nucleus ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
kxDL motif protein
NP_001189998.1
  • FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Domain of unknown function KxDL (InterPro:IPR019371).
NP_189557.2
  • CONTAINS InterPro DOMAIN/s: Domain of unknown function KxDL (InterPro:IPR019371); Has 135 Blast hits to 135 proteins in 54 species: Archae - 0; Bacteria - 0; Metazoa - 106; Fungi - 0; Plants - 26; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003074.8 Reference assembly

    Range
    11099603..11104073 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001339007.1 → NP_001326300.1  kxDL motif protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178VHH2, A0A1I9LNV2

  2. NM_001339009.1 → NP_001326299.1  kxDL motif protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178VK21, A0A654FCS9, Q9LVP5

  3. NM_001339008.1 → NP_001326297.1  kxDL motif protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178VHH2, A0A1I9LNV2

  4. NM_001203069.1 → NP_001189998.1  kxDL motif protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_001189998.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    F4J1T2
    Conserved Domains (1) summary
    pfam10241
    Location:64 → 141
    KxDL; Uncharacterized conserved protein

  5. NM_001339010.1 → NP_001326298.1  kxDL motif protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178VK21, A0A654FCS9, Q9LVP5

  6. NM_113836.2 → NP_189557.2  kxDL motif protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_189557.2

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178VK21, A0A654FCS9, Q9LVP5
    Conserved Domains (1) summary
    pfam10241
    Location:15 → 92
    KxDL; Uncharacterized conserved protein
Nucleotide Protein
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