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AAR3 defective in cullin neddylation protein (DUF298) [ Arabidopsis thaliana (thale cress) ]

Gene ID: 822537, updated on 18-Sep-2024

Summary

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Official Symbol
AAR3
Official Full Name
defective in cullin neddylation protein (DUF298)
Primary source
TAIR:AT3G28970
Locus tag
AT3G28970
See related
Araport:AT3G28970
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
antiauxin-resistant 3
Summary
Identified in a screen for mutants resistant to an anti-auxin. Encodes a protein with unknown function that shares homology with DCN protein family.
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Genomic context

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See AAR3 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
9
Sequence:
Chromosome: 3; NC_003074.8 (10987785..10990016, complement)

Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene RNA polymerase II, Rpb4, core protein Neighboring gene Cupredoxin superfamily protein Neighboring gene Transmembrane amino acid transporter family protein Neighboring gene ncRNA Neighboring gene mediator of RNA polymerase II transcription subunit-like protein, putative (DUF1216)

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003074.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genetic characterization of mutants resistant to the antiauxin p-chlorophenoxyisobutyric acid reveals that AAR3, a gene encoding a DCN1-like protein, regulates responses to the synthetic auxin 2,4-dichlorophenoxyacetic acid in Arabidopsis roots. Biswas KK, et al. Plant Physiol, 2007 Nov. PMID 17905859, Free PMC Article
  2. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

GeneRIFs: Gene References Into Functions

General gene information

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NM_113818.4

Gene Ontology Provided by TAIR

Process Evidence Code Pubs
acts_upstream_of_or_within auxin-activated signaling pathway IMP
Inferred from Mutant Phenotype
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus ISM
Inferred from Sequence Model
more info
  
located_in nucleus ISS
Inferred from Sequence or Structural Similarity
more info
 PubMed 

General protein information

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Preferred Names
defective in cullin neddylation protein (DUF298)
NP_189539.1
  • antiauxin-resistant 3 (AAR3); CONTAINS InterPro DOMAIN/s: Defective-in-cullin neddylation protein (InterPro:IPR014764), Protein of unknown function DUF298 (InterPro:IPR005176); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G12760.1); Has 786 Blast hits to 786 proteins in 193 species: Archae - 0; Bacteria - 0; Metazoa - 464; Fungi - 133; Plants - 125; Viruses - 0; Other Eukaryotes - 64 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003074.8 Reference assembly

    Range
    10987785..10990016 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001338993.1 → NP_001326021.1  defective in cullin neddylation protein (DUF298) [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A1I9LN05, A0A5S9XGX1, A0A654FCR1

  2. NM_113818.4 → NP_189539.1  defective in cullin neddylation protein (DUF298) [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_189539.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q9MBG8
    UniProtKB/TrEMBL
    A0A5S9XGX1, A0A654FCR1
    Conserved Domains (1) summary
    pfam03556
    Location:82 → 178
    Cullin_binding; Cullin binding
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9MBG8.1

Gene LinkOut

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