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ABCB17 P-glycoprotein 17 [ Arabidopsis thaliana (thale cress) ]

Gene ID: 822467, updated on 18-Sep-2024

Summary

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Official Symbol
ABCB17
Official Full Name
P-glycoprotein 17
Primary source
TAIR:AT3G28380
Locus tag
AT3G28380
See related
Araport:AT3G28380
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
ATP-binding cassette B17; P-glycoprotein 17; PGP17
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Genomic context

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See ABCB17 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
7
Sequence:
Chromosome: 3; NC_003074.8 (10623699..10628201, complement)

Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene P-glycoprotein 16 Neighboring gene ncRNA Neighboring gene spindle assembly checkpoint component Neighboring gene P-glycoprotein 18 Neighboring gene pseudo

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003074.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. 14-3-3 proteins fine-tune plant nutrient metabolism. Shin R, et al. FEBS Lett, 2011 Jan 3. PMID 21094157
  2. Arabidopsis plasmodesmal proteome. Fernandez-Calvino L, et al. PLoS One, 2011 Apr 20. PMID 21533090, Free PMC Article
  3. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Markers

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables ABC-type transporter activity IEA
Inferred from Electronic Annotation
more info
  
enables ATP hydrolysis activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in transmembrane transport IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in plasmodesma HDA PubMed 

General protein information

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Preferred Names
P-glycoprotein 17
NP_189479.1
  • P-glycoprotein 17 (PGP17); FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances, nucleoside-triphosphatase activity, ATPase activity, nucleotide binding, ATP binding; INVOLVED IN: transport, transmembrane transport; LOCATED IN: plasma membrane; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC transporter, transmembrane domain, type 1 (InterPro:IPR011527), ABC transporter integral membrane type 1 (InterPro:IPR017940), ABC transporter, transmembrane domain (InterPro:IPR001140), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: P-glycoprotein 18 (TAIR:AT3G28390.1); Has 843041 Blast hits to 392204 proteins in 4166 species: Archae - 14548; Bacteria - 659973; Metazoa - 17582; Fungi - 11884; Plants - 9780; Viruses - 43; Other Eukaryotes - 129231 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003074.8 Reference assembly

    Range
    10623699..10628201 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_113758.2 → NP_189479.1  P-glycoprotein 17 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_189479.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q9LSJ6
    UniProtKB/TrEMBL
    A0A654FCJ4, A0A7G2ERF2
    Conserved Domains (3) summary
    cd03249
    Location:359 → 597
    ABC_MTABC3_MDL1_MDL2; ATP-binding cassette domain of a mitochondrial protein MTABC3 and related proteins
    PTZ00265
    Location:34 → 1233
    PTZ00265; multidrug resistance protein (mdr1); Provisional
    pfam00664
    Location:676 → 939
    ABC_membrane; ABC transporter transmembrane region
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9LSJ6.1

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