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uncharacterized protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 822360, updated on 18-Sep-2024

Summary

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Official Full Name
uncharacterized protein
Primary source
TAIR:AT3G27390
Locus tag
AT3G27390
See related
Araport:AT3G27390
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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Genomic context

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Location:
chromosome: 3
Exon count:
8
Sequence:
Chromosome: 3; NC_003074.8 (10133177..10136665, complement)

Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene transcriptional regulator ATRX-like protein Neighboring gene Hop-interacting protein Neighboring gene Histone superfamily protein Neighboring gene succinate dehydrogenase 2-1 Neighboring gene ncRNA Neighboring gene Pectin lyase-like superfamily protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003074.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Novel Aquaporin Regulatory Mechanisms Revealed by Interactomics. Bellati J, et al. Mol Cell Proteomics, 2016 Nov. PMID 27609422, Free PMC Article
  2. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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NM_001338871.1
NM_113654.4

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
  

General protein information

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Preferred Names
uncharacterized protein
NP_189375.2
  • unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G40640.1); Has 101 Blast hits to 99 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 101; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003074.8 Reference assembly

    Range
    10133177..10136665 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_113654.4 → NP_189375.2  uncharacterized protein AT3G27390 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_189375.2

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q8GUM4, Q9LTZ1
    UniProtKB/TrEMBL
    A0A178VDA0, A0A5S9XG53, A0A654FB76

  2. NM_001338871.1 → NP_001326596.1  uncharacterized protein AT3G27390 [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q8GUM4, Q9LTZ1
    UniProtKB/TrEMBL
    A0A178VDA0, A0A5S9XG53, A0A654FB76
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q8GUM4.2

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