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GTE8 global transcription factor group E8 [ Arabidopsis thaliana (thale cress) ]

Gene ID: 822345, updated on 18-Sep-2024

Summary

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Official Symbol
GTE8
Official Full Name
global transcription factor group E8
Primary source
TAIR:AT3G27260
Locus tag
AT3G27260
See related
Araport:AT3G27260
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
GLOBAL TRANSCRIPTION FACTOR GROUP E; global transcription factor group E8
Summary
Kinase like protein with similarity to yeast BDF1 and human RING3 protein, which have two bromodomains GTE8 has a single bromodomain
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Genomic context

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See GTE8 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
11
Sequence:
Chromosome: 3; NC_003074.8 (10067529..10072760)

Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene uncharacterized protein Neighboring gene TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein Neighboring gene prohibitin 4 Neighboring gene miscRNA

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003074.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sorting signals, N-terminal modifications and abundance of the chloroplast proteome. Zybailov B, et al. PLoS One, 2008 Apr 23. PMID 18431481, Free PMC Article
  2. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

GeneRIFs: Gene References Into Functions

General gene information

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Homology

NM_001203056.2
NM_001338863.1
NM_001338864.1
NM_113640.2

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Component Evidence Code Pubs
located_in chloroplast HDA PubMed 
located_in nucleus ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
global transcription factor group E8
NP_001189985.1
  • global transcription factor group E8 (GTE8); FUNCTIONS IN: DNA binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Bromodomain (InterPro:IPR001487); BEST Arabidopsis thaliana protein match is: bromodomain and extraterminal domain protein 9 (TAIR:AT5G14270.1).
NP_189362.1
  • global transcription factor group E8 (GTE8); FUNCTIONS IN: DNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Bromodomain (InterPro:IPR001487); BEST Arabidopsis thaliana protein match is: bromodomain and extraterminal domain protein 9 (TAIR:AT5G14270.1); Has 14889 Blast hits to 11609 proteins in 999 species: Archae - 15; Bacteria - 2194; Metazoa - 6003; Fungi - 1991; Plants - 973; Viruses - 60; Other Eukaryotes - 3653 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003074.8 Reference assembly

    Range
    10067529..10072760
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001203056.2 → NP_001189985.1  global transcription factor group E8 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_001189985.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A654FB44, F4JEZ0
    Conserved Domains (2) summary
    cd05506
    Location:127 → 225
    Bromo_plant1; Bromodomain, uncharacterized subfamily specific to plants. Might function as a global transcription factor. Bromodomains are 110 amino acid long domains, that are found in many chromatin associated proteins. Bromodomains can interact specifically with ...
    pfam17035
    Location:281 → 348
    BET; Bromodomain extra-terminal - transcription regulation

  2. NM_001338864.1 → NP_001327404.1  global transcription factor group E8 [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A1I9LS78, A0A654FB44

  3. NM_001338863.1 → NP_001327403.1  global transcription factor group E8 [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A1I9LS77, A0A654FB44

  4. NM_113640.2 → NP_189362.1  global transcription factor group E8 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_189362.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q8W4J0, Q9LK27
    UniProtKB/TrEMBL
    A0A5S9XG79, A0A654FB44
    Conserved Domains (2) summary
    cd05506
    Location:176 → 274
    Bromo_plant1; Bromodomain, uncharacterized subfamily specific to plants. Might function as a global transcription factor. Bromodomains are 110 amino acid long domains, that are found in many chromatin associated proteins. Bromodomains can interact specifically with ...
    pfam17035
    Location:330 → 393
    BET; Bromodomain extra-terminal - transcription regulation
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9LK27.2

Gene LinkOut

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